 |
Job Description | P64423 | Confidence | 8.79% | Date | Thu Jan 5 12:08:12 GMT 2012 |
Rank | 48 | Aligned Residues | 61 |
% Identity | 16% | Template | c2zqpY_ |
PDB info |
PDB header:protein transport | Chain: Y: PDB Molecule:preprotein translocase secy subunit; |
PDBTitle: crystal structure of secye translocon from thermus2 thermophilus
|
Resolution | 6.00 Å |
|
 |
  |   |
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | N | L | A | R | R | T | Y | T | M | S | L | M | A | M | V | F | L | P | S | T | F | L | T | G | L | F | G | V | N | . |
. |
L | G | G | I | P | G | G | G | W | Q | F | G | F | S | I | F | C | I | L | L | V | V | L | I | G | G | V | A | L | W | L |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
| . | . |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|   |
|
|
|
Template Sequence |   |
R | I | I | N | Q | Y | T | R | I | G | G | I | A | L | G | A | F | Q | G | F | F | L | A | T | A | F | L | G | A | E | G | G | R | F | L | L | P | G | W | S | P | G | P | F | F | W | F | V | V | V | V | T | Q | V | A | G | I | A | L | L | L | W | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  | T | T | T | T |  |  |  |  |
| S | S | S | B |
| S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|