Return to main results Retrieve Phyre Job Id

Job DescriptionP64423
Confidence7.24%DateThu Jan 5 12:08:12 GMT 2012
Rank74Aligned Residues87
% Identity15%Templatec2lchA_
PDB info PDB header:de novo proteinChain: A: PDB Molecule:protein or38; PDBTitle: solution nmr structure of a protein with a redesigned hydrophobic2 core, northeast structural genomics consortium target or38
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160.........170.........180.........190......... 200.........210......
Predicted Secondary structure 


............
Query SS confidence 


















































. . . . . . . . . . . .
















Query Sequence  DVCDALTDHSSEFIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRR. . . . . . . . . . . . YMAPQRDVYARLASERL
Query Conservation   


  
      
  
   

 

  
          
  


 
  
 
............ 
      
  
     
Alig confidence 

























.....



















............
















Template Conservation 


  

 

 
 
  
   
  

 .....          
 
  






   
   
  

  

  
        
Template Sequence  EYIKKVTDELKELIQNVNDDIKEVEK. . . . . NPEDMEYWNKIYRLVHTMKEITETMGFSSVAKVLHTIMNLVDKMLNSEI
Template Known Secondary structure  .....
TT
T
TSTTT
Template Predicted Secondary structure  .....









Template SS confidence 















































































   6...10.........20.........30. ........40.........50.........60.........70.........80
 
   217..220.........230.........240.
Predicted Secondary structure 


Query SS confidence 
























Query Sequence  PWMSDDQRRRMQDIADRLGRGLDEI
Query Conservation            
 

           
Alig confidence 
.






















Template Conservation   .        
    
 
   
   
Template Sequence  K. ITSDLIDKVKKKLDMVTRELDKK
Template Known Secondary structure 
.

GGG
Template Predicted Secondary structure 
.

Template SS confidence 
























   81 ........90.........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions