|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | K | G | S | D | V | N | V | P | D | A | V | F | A | W | M | L | D | G | R | G | G | V | K | P | L | E | . |
. |
. |
. |
. |
. |
. |
. |
N | T | D | V | I | D | E | A | H | P | C | W | L | H | L | N | Y | V | H | H | D | S | . |
A | Q | W | L | A | T | T | P | L | L | P | N | N | V | R | D | A | L | A | G | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   | . |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |
Template Sequence |   |
V | F | T | G | E | K | K | V | E | E | T | K | I | T | A | A | I | Y | D | E | K | S | V | E | F | K | E | L | E | V | G | E | L | E | S | V | V | R | S | A | L | A | L | N | K | K | L | W | I | D | V | V | G | V | H | D | E | S | L | I | A | K | I | C | E | F | L | G | I | H | P | L | A | A | E | D | I | L | N | T |
Template Known Secondary structure |   |
|
| B |
|
|
|
| S | S |
|
|
|
|  |  |  |  |  |
| S | S | S | S |
|  |  |
|
|
|
|
|
| S |  |  |  |  | S | T | T |
|
| T | T | S |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  | B | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
. | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | R | P | R | V | S | R | L | G | E | G | T | L | I | T | L | R | C | I | N | G | S | T | D | E | R | P | D | Q | L | V | A | M | R | V | Y | M | D | G | R | L | I | V | S | T | R | Q | R | K | V | L | A | L | D | D | V | V | S | D | L | E | E | G | T | G | P | . |
. |
T | D | C | G | G | W | L | V | D | V | C |
Query Conservation |   |
  |   |
|
|
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
Template Sequence |   |
A | Q | R | V | K | I | E | D | Y | D | D | H | L | F | L | V | L | K | I | L | L | Y | . |
. |
. |
N | E | T | L | E | I | D | Q | L | S | L | V | L | K | K | N | L | V | A | T | F | E | E | R | E | Y | W | I | L | D | S | I | R | S | R | L | K | S | G | G | R | M | R | K | L | A | G | D | Y | L | A | Y | T | I | L |
Template Known Secondary structure |   |
T |
|
| S |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S | S | S |
| S | T |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
  |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | L | T | D | H | S | S | E | F | I | E | Q | L | H | D | K | I | I | D | L | E | D | N | L | L | D | Q | Q | I | P | P | R | G | F | L | A | L | L | R | K | Q | L | I | V | M | R | R | Y | M | A | P | Q | R | D | V | Y | A | R | L | A | S | E | R | L | P | W | M | S | D | D | Q | R | R | R | M | Q | D | I | A |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
Template Sequence |   |
D | A | V | V | D | S | Y | F | E | A | L | L | K | I | S | D | E | I | E | V | L | E | D | E | V | V | S | G | D | S | T | L | I | G | K | I | H | S | L | K | R | E | I | L | A | F | R | N | A | V | W | P | L | R | D | V | L | S | F | F | T | R | V | E | H | E | L | I | G | E | E | V | K | V | Y | Y | R | D | V | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | S |
| T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |
  |   |
232 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | L | G | R | G | L | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |
|
Template Sequence |   |
D | H | A | V | R | L | M | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
256 | . | . | . | 260 | . | . | . |
  |