Job Description P64423 Confidence 100.00% Date Thu Jan 5 12:08:12 GMT 2012 Rank 1 Aligned Residues 317 % Identity 15% Template c2bbjB_ PDB info PDB header:metal transport/membrane protein Chain: B: PDB Molecule:divalent cation transport-related protein; PDBTitle: crystal structure of the cora mg2+ transporter Resolution 3.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.																					.
Query SS confidence																																	.	.	.	.	.																					.
Query Sequence		E	A	I	K	G	S	D	V	N	V	P	D	A	V	F	A	W	M	L	D	G	R	G	G	V	K	P	L	E	N	T	.	.	.	.	.	D	V	I	D	E	A	H	P	C	W	L	H	L	N	Y	V	H	H	D	S	.	A	Q	W	L	A	T	T	P	L	L	P	N	N	V	R	D	A	L	A	G	E	S	T
Query Conservation																																	.	.	.	.	.																					.
Alig confidence																																	.	.	.	.	.																					.
Template Conservation
Template Sequence		T	L	V	Y	T	G	K	Y	R	E	D	F	E	I	E	V	M	N	Y	S	I	E	E	F	R	E	F	K	T	T	D	V	E	S	V	L	P	F	R	D	S	S	T	P	T	W	I	N	I	T	G	I	H	R	T	D	V	V	Q	R	V	G	E	F	F	G	I	H	P	L	V	L	E	D	I	L	N	V	H	Q
Template Known Secondary structure							S	S		T	T											S	S								S		S	T	T	T	G	G	G	G	G		S	S									T	T													T												T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		R	P	R	V	S	R	L	G	E	G	T	L	I	T	L	R	C	I	N	G	S	T	D	E	R	P	D	Q	L	V	A	M	R	V	Y	M	D	G	R	L	I	V	S	T	R	Q	R	K	V	L	A	L	D	D	V	V	S	D	L	E	E	G	T	G	.	.	.	P	T	D	C	G	G	W	L	V	D	V	C	D
Query Conservation																																																																		.	.	.
Alig confidence																																																																		.	.	.
Template Conservation
Template Sequence		R	P	K	V	E	F	F	E	N	Y	V	F	I	V	L	K	M	F	T	Y	D	K	N	L	H	E	L	E	S	E	Q	V	S	L	I	L	T	K	N	C	V	L	M	F	Q	E	K	I	G	D	V	F	D	P	V	R	E	R	I	R	Y	N	R	G	I	I	R	K	K	R	A	D	Y	L	L	Y	S	L	I	D
Template Known Secondary structure									S	S													S	S	S														T	T							S	S	S			S										T	T		T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		A	L	T	D	H	S	S	E	F	I	E	Q	L	H	D	K	I	I	D	L	E	D	N	L	L	D	Q	.	Q	I	P	P	R	G	F	L	A	L	L	R	K	Q	L	I	V	M	R	R	Y	M	A	P	Q	R	D	V	Y	A	R	L	A	S	E	R	L	P	W	M	S	D	D	Q	R	R	R	M	Q	D	I	A
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		A	L	V	D	D	Y	F	V	L	L	E	K	I	D	D	E	I	D	V	L	E	E	E	V	L	E	R	P	E	K	E	T	V	Q	R	T	H	Q	L	K	R	N	L	V	E	L	R	K	T	I	W	P	L	R	E	V	L	S	S	L	Y	R	D	V	P	P	L	I	E	K	E	T	V	P	Y	F	R	D	V	Y
Template Known Secondary structure																								T	T	T	S	S		S	S																																	S		T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	L	G	R	G	L	D	E	I	D	A	C	I	A	R	T	G	V	M	A	D	E	I	A	Q	V	M	Q	E	N	L	A	R	R	T	Y	T	M	S	L	M	A	M	V	F	L	P	S	T	F	L	T	G	L	F	G	V	N	L	G	G	I	P	G	G	G	W	Q	F	G	F	S	I	F	C	I	L	L	V
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		D	H	T	I	Q	I	A	D	T	V	E	T	F	R	D	I	V	S	G	L	L	D	V	Y	L	S	S	V	S	N	K	T	N	E	V	M	K	V	L	T	I	I	A	T	I	F	M	P	L	T	F	I	A	G	I	Y	G	M	N	F	.	.	.	.	.	.	.	W	K	W	G	Y	P	V	V	L	A	V	M	G
Template Known Secondary structure																				T																											T	T					T	T	T	T	T	T				.	.	.	.	.	.	.					S	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.								.	.	.	.	320	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	G	G	V	A	L	W	L	H	R	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	A	V	I	M	V	V	Y	F	K	K	K	K
Template Known Secondary structure											T	T	S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions