Job Description P64423 Confidence 7.65% Date Thu Jan 5 12:08:12 GMT 2012 Rank 62 Aligned Residues 154 % Identity 12% Template c1htjF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:kiaa0380; PDBTitle: structure of the rgs-like domain from pdz-rhogef Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		R	L	I	V	S	T	R	Q	R	K	V	L	A	L	D	D	V	V	S	D	L	E	E	G	T	G	P	T	D	C	G	G	W	L	V	D	V	C	D	A	L	T	D	H	S	S	E	F	I	E	Q	L	H	D	K	I	I	D	L	E	D	N	L	L	D	Q	Q	I	P	P	R	G	F	L	A	L	L	R	.	K
Query Conservation																																																																																.
Alig confidence							.																																																																									.
Template Conservation							.
Template Sequence		R	Y	I	F	S	.	Q	A	D	P	S	P	L	L	F	Y	L	C	A	E	V	Y	Q	Q	A	S	P	K	D	S	R	S	L	G	K	D	I	W	N	I	F	L	E	K	N	A	P	L	R	V	K	I	P	E	X	L	Q	A	E	I	D	S	R	L	R	N	S	E	D	A	R	G	V	L	C	E	A	Q	E	A
Template Known Secondary structure							.		S															T	T	S		T	T														T	S	T	T		T	T																		T	T
Template Predicted Secondary structure							.
Template SS confidence
		329	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	V	M	R	R	Y	M	A	P	Q	R	D	V	Y	A	R	L	A	S	E	R	L	P	W	M	S	D	D	Q	R	R	R	M	Q	D	I	A	D	R	L	G	R	G	L	D	E	I	D	A	C	I	A	R	T	G	V	M	A	D	E	I	A	Q	V	M	Q	E	N	L	A	R	R	T	Y	T	M
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		A	X	P	E	I	Q	E	Q	I	H	D	Y	R	T	.	.	K	R	T	L	G	L	G	S	L	Y	G	E	N	D	L	L	D	L	D	G	D	P	L	R	E	R	Q	V	A	E	K	Q	L	A	A	L	G	D	I	L	S	A	Y	A	A	D	R	S	A	P	X	D	F	A	L	N	T	Y	X	S	H	A
Template Known Secondary structure																.	.				T	T		G	G	G	G	T	T	T	G	G	G	G			S																						T	S																			T
Template Predicted Secondary structure																.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions