Job Description P13016 Confidence 99.97% Date Thu Jan 5 11:33:25 GMT 2012 Rank 18 Aligned Residues 155 % Identity 11% Template d2f2la1 SCOP info N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like Resolution 2.10

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		8	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	V	G	A	R	R	V	.	P	S	P	H	Y	D	C	R	P	D	D	E	T	P	T	L	L	V	V	H	N	I	S	L	P	P	G	E	F	G	G	P	W	I	D	A	L	F	T	G	T	I	D	P	Q	A	H	P	F	F	A	E	I	A	H	L	R	V	S	A	H	C	L	I	R	R	D	G	E	I	V	Q
Query Conservation									.
Alig confidence									.																																								.	.	.	.	.							.
Template Conservation																																																	.	.	.	.	.							.
Template Sequence		V	E	R	Q	Q	W	L	A	Q	P	P	Q	K	E	I	P	D	L	E	L	P	V	G	L	V	I	A	L	P	T	N	S	E	N	C	S	T	Q	A	I	C	V	L	R	V	R	L	.	.	.	.	.	L	Q	T	Y	D	I	.	E	S	S	Q	K	D	I	A	Y	N	F	L	I	G	G	D	G	N	V	Y	V
Template Known Secondary structure		B		G	G	G	G	T					S	S				B			S	S											S				S	S											.	.	.	.	.							.		T	S					S		S					T	T	S
Template Predicted Secondary structure																																																	.	.	.	.	.							.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.						.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																		.																																.
Query SS confidence																																		.																																.
Query Sequence		Y	V	P	F	D	K	R	A	W	H	A	G	V	S	Q	Y	Q	G	R	E	R	C	N	D	F	S	I	G	I	E	L	E	.	G	T	D	T	L	A	Y	T	D	A	Q	Y	Q	Q	L	A	A	V	T	R	A	L	I	D	C	Y	P	D	I	A	K	.	N	M	T	G	H	C	D	I	A	P	D	R	K	T	D
Query Conservation																																		.																																.
Alig confidence																.	.	.	.	.	.													.																																.
Template Conservation																.	.	.	.	.	.
Template Sequence		G	R	G	W	N	K	M	G	A	H	M	N	N	I	.	.	.	.	.	.	N	Y	D	S	Q	S	L	S	F	A	Y	I	G	S	F	K	T	I	Q	P	S	A	K	Q	L	S	V	T	R	L	L	L	E	R	G	V	K	L	G	K	I	A	P	S	Y	R	F	T	A	S	S	K	L	M	P	S	V	T	D	F
Template Known Secondary structure		S	S	T	T	T	B				S	S	S			.	.	.	.	.	.				T	T							S	S			S	S	S																				T	T	S															T	T		G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.							.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		165	.	.	.	.						170	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		P	G	P	A	F	.	.	.	.	.	D	W	A	R	F
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		K	A	D	A	L	Y	A	S	F	A	N	W	T	H	W
Template Known Secondary structure									T	T	T	T		T	T	B
Template Predicted Secondary structure
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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