Job Description P13016 Confidence 100.00% Date Thu Jan 5 11:33:25 GMT 2012 Rank 6 Aligned Residues 154 % Identity 16% Template d1ycka1 SCOP info N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like Resolution 1.70

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	A	R	R	V	P	S	P	H	Y	D	C	R	P	D	D	E	T	P	T	L	L	V	V	H	N	I	S	L	P	P	G	E	F	G	G	P	W	I	D	A	L	F	T	G	T	I	D	P	Q	A	H	P	F	F	A	E	I	A	H	L	R	V	S	A	H	C	L	I	R	R	D	G	E	I	V	Q	Y
Query Conservation
Alig confidence																																			.														.	.	.	.
Template Conservation																																			.														.	.	.	.
Template Sequence		V	P	R	N	E	W	K	A	L	A	S	E	C	A	Q	H	L	S	L	P	L	R	Y	V	V	V	S	H	T	A	G	S	S	.	C	N	T	P	A	S	C	Q	Q	Q	A	R	N	.	.	.	.	V	Q	H	Y	H	M	K	T	L	G	W	C	D	V	G	Y	N	F	L	I	G	E	D	G	L	V	Y	E	G
Template Known Secondary structure		B						T									B			S	S										S	S			.			S											.	.	.	.								T	T			S	S		S		S					T	T	S					S
Template Predicted Secondary structure																																			.														.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																			.																											.
Query SS confidence																																			.																											.
Query Sequence		V	P	F	D	K	R	A	W	H	A	G	V	S	Q	Y	Q	G	R	E	R	C	N	D	F	S	I	G	I	E	L	E	G	T	.	D	T	L	A	Y	T	D	A	Q	Y	Q	Q	L	A	A	V	T	R	A	L	I	D	C	Y	P	D	.	I	A	K	N	M	T	G	H	C	D	I	A	P	D	R	K	T	D	P
Query Conservation																																			.																											.
Alig confidence																.	.	.	.	.	.	.													.																											.														.	.
Template Conservation																.	.	.	.	.	.	.																																																						.	.
Template Sequence		R	G	W	N	F	T	G	A	H	S	G	H	L	W	.	.	.	.	.	.	.	N	P	M	S	I	G	I	S	F	M	G	N	Y	M	D	R	V	P	T	P	Q	A	I	R	A	A	Q	G	L	L	A	C	G	V	A	Q	G	A	L	R	S	N	Y	V	L	K	G	H	R	D	V	Q	R	.	.	T	L	S	P
Template Known Secondary structure		S	T	T	T	B			S	S	S		T	T	T	.	.	.	.	.	.	.	G	G	G							S	S			S	S	S																				T	T	S										G	G	G	T	S	S	.	.	S		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.																																																						.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.
		166	.	.	.						170	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		G	P	A	F	.	.	.	.	.	D	W	A	R	F	R
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.
Template Conservation
Template Sequence		G	N	Q	L	Y	H	L	I	Q	N	W	P	H	Y	R
Template Known Secondary structure										T	T	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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