Job Description P13016 Confidence 100.00% Date Thu Jan 5 11:33:25 GMT 2012 Rank 13 Aligned Residues 152 % Identity 14% Template d1sk4a_ SCOP info N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like Resolution 1.65

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	A	R	R	V	P	S	P	H	Y	D	C	R	P	D	D	E	T	P	T	L	L	V	V	H	N	I	S	L	P	P	G	E	F	G	G	P	W	I	D	A	L	F	T	G	T	I	D	P	Q	A	H	P	F	F	A	E	I	A	H	L	R	V	S	A	H	C	L	I	R	R	D	G	E	I	V	Q	Y
Query Conservation
Alig confidence																	.																															.	.	.	.	.
Template Conservation																	.																															.	.	.	.	.
Template Sequence		I	K	R	S	A	W	E	A	R	E	T	H	C	P	K	.	M	N	L	P	A	K	Y	V	I	I	I	H	T	A	G	T	S	C	T	V	S	T	D	C	Q	T	V	V	R	N	.	.	.	.	.	I	Q	S	F	H	M	D	T	R	N	F	C	D	I	G	Y	H	F	L	V	G	Q	D	G	G	V	Y	E	G
Template Known Secondary structure		B		G	G	G	G	T								B	.			S	S											S				S	S											.	.	.	.	.								T	S			S	S		S		S					T	T	S					S
Template Predicted Secondary structure																	.																															.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		V	P	F	D	K	R	A	W	H	A	G	V	S	Q	Y	Q	G	R	E	R	C	N	D	F	S	I	G	I	E	L	E	.	G	T	D	T	L	A	Y	T	D	A	Q	Y	Q	Q	L	A	A	V	T	R	A	L	I	D	C	Y	P	D	I	A	K	N	M	T	G	H	C	D	I	A	P	D	R	K	T	D	P	G
Query Conservation																																	.
Alig confidence													.	.	.	.	.	.	.	.													.																																										.	.
Template Conservation													.	.	.	.	.	.	.	.																																																							.	.
Template Sequence		V	G	W	H	I	Q	G	S	H	T	Y	.	.	.	.	.	.	.	.	G	F	N	D	I	A	L	G	I	A	F	I	G	Y	F	V	E	K	P	P	N	A	A	A	L	E	A	A	Q	D	L	I	Q	A	V	V	E	G	Y	L	T	P	N	Y	L	L	M	G	H	S	D	V	V	N	.	.	I	L	S	P	G
Template Known Secondary structure		S		T	T	B				S	S	T	.	.	.	.	.	.	.	.	T		T	T	T							S	S			S	S	S																	T	T	T	T	S										G	G	G	S	T	T	.	.	S			T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																																																							.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.
		167	.	.						170	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		P	A	F	.	.	.	.	.	D	W	A	R	F	R
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.
Template Conservation
Template Sequence		Q	A	L	Y	N	I	I	S	T	W	P	H	F	K
Template Known Secondary structure		S							T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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