Job Description P13016 Confidence 100.00% Date Thu Jan 5 11:33:25 GMT 2012 Rank 1 Aligned Residues 183 % Identity 87% Template d1j3ga_ SCOP info N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	L	E	Q	G	W	L	V	G	A	R	R	V	P	S	P	H	Y	D	C	R	P	D	D	E	T	P	T	L	L	V	V	H	N	I	S	L	P	P	G	E	F	G	G	P	W	I	D	A	L	F	T	G	T	I	D	P	Q	A	H	P	F	F	A	E	I	A	H	L	R	V	S	A	H	C	L	I	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	L	D	E	G	W	L	A	E	A	R	R	V	P	S	P	H	Y	D	C	R	P	D	D	E	N	P	S	L	L	V	V	H	N	I	S	L	P	P	G	E	F	G	G	P	W	I	D	A	L	F	T	G	T	I	D	P	N	A	H	P	Y	F	A	G	I	A	H	L	R	V	S	A	H	C	L	I	R	R
Template Known Secondary structure						T	T			S	S	S						S	S					S					S											S		S	S												T				T	T	S								T	T	S			B		S					T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	I	V	Q	Y	V	P	F	D	K	R	A	W	H	A	G	V	S	Q	Y	Q	G	R	E	R	C	N	D	F	S	I	G	I	E	L	E	G	T	D	T	L	A	Y	T	D	A	Q	Y	Q	Q	L	A	A	V	T	R	A	L	I	D	C	Y	P	D	I	A	K	N	M	T	G	H	C	D	I	A	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	E	I	V	Q	Y	V	P	F	D	K	R	A	W	H	A	G	V	S	S	Y	Q	G	R	E	R	C	N	D	F	S	I	G	I	E	L	E	G	T	D	T	L	A	Y	T	D	A	Q	Y	Q	Q	L	A	A	V	T	N	A	L	I	T	R	Y	P	A	I	A	N	N	M	T	G	H	C	N	I	A	P	E
Template Known Secondary structure		T	T						S		S	S	S			B		S	S					T	T				S	S			S								S	T	T					T																	S	T	T	G	G	G					S	S	T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	T	D	P	G	P	A	F	D	W	A	R	F	R	V	L	V	S	K	E	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	T	D	P	G	P	S	F	D	W	A	R	F	R	A	L	V	T	P	S	S	H
Template Known Secondary structure		T		S	S	S	S			S									S			S		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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