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Job DescriptionP13016
Confidence100.00%DateThu Jan 5 11:33:25 GMT 2012
Rank8Aligned Residues154
% Identity16%Templatec2xz4A_
PDB info PDB header:immune systemChain: A: PDB Molecule:peptidoglycan-recognition protein lf; PDBTitle: crystal structure of the lfz ectodomain of the2 peptidoglycan recognition protein lf
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10..... ....20.........30.........40.........50.........60.........70.........80......
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Query Sequence  LVGARRVP. SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ
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Template Sequence  LDRSEWLGEPPSGKYPHLKLPVSNIIIHHTATEGCEQEDVCIYRMKT. . . . . IQAFHMKSFGWVDIGYNFLVGGDGQIYV
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   60.........70.........80.........90.........100...... ...110.........120.........130....
 
   87..90.........100.........110.........120 .........130.........140......... 150.........160....
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Query Sequence  YVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT. DTLAYTDAQYQQLAAVTRALIDCYPDIAK. NMTGHCDIAPDRKTD
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Template Sequence  GRGWHIQGQHVN. . . . . . . . GYGAISVSIAFIGTFVNMEPPARQIEAAKRLMDEGVRLHRLQPDYHIYAHRQLSP. . TES
Template Known Secondary structure  SS
SSB



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   135....140...... ...150.........160.........170.........180.........190.........200. ...
 
   165.... 170......
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Query Sequence  PGPAF. . . . . DWARFRV
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Template Sequence  PGQKLFELMQNWPRFTQ
Template Known Secondary structure  T
TTSTTB

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   205....210.........220.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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