Job Description P13016 Confidence 100.00% Date Thu Jan 5 11:33:25 GMT 2012 Rank 9 Aligned Residues 150 % Identity 15% Template c2rkqA_ PDB info PDB header:immune system Chain: A: PDB Molecule:peptidoglycan-recognition protein-sd; PDBTitle: crystal structure of drosophila peptidoglycan recognition2 protein sd (pgrp-sd) Resolution 1.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	S	P	H	Y	D	C	R	P	D	D	E	T	P	T	L	L	V	V	H	N	I	S	L	P	P	G	E	F	G	G	P	W	I	D	A	L	F	T	G	T	I	D	P	Q	A	H	P	F	F	A	E	I	A	H	L	R	V	S	A	H	C	L	I	R	R	D	G	E	I	V	Q	Y	V	P	F	D	K	R
Query Conservation
Alig confidence																																										.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		A	K	P	P	N	G	A	I	D	S	M	V	T	P	L	P	R	A	V	I	A	H	T	A	G	G	A	C	A	D	D	V	T	C	S	Q	H	M	R	N	.	.	.	.	.	L	Q	N	F	Q	M	S	K	Q	K	F	S	D	I	G	Y	H	Y	L	I	G	G	N	G	K	V	Y	E	G	R	S	P	S	Q	R
Template Known Secondary structure							S				B			S	S											S					S											.	.	.	.	.								T	S			S	S		S		S					T	T	S						S		T	T	B
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																																.																					.	.
Query SS confidence																											.																																.																					.	.
Query Sequence		A	W	H	A	G	V	S	Q	Y	Q	G	R	E	R	C	N	D	F	S	I	G	I	E	L	E	.	G	T	D	T	L	A	Y	T	D	A	Q	Y	Q	Q	L	A	A	V	T	R	A	L	I	D	C	Y	P	D	I	A	K	.	N	M	T	G	H	C	D	I	A	P	D	R	K	T	D	P	G	P	A	F	.	.
Query Conservation																											.																																.																					.	.
Alig confidence							.	.	.	.	.	.	.	.													.																																.											.	.									.	.
Template Conservation							.	.	.	.	.	.	.	.																																																								.	.
Template Sequence		G	A	F	A	G	.	.	.	.	.	.	.	.	P	N	N	D	G	S	L	G	I	A	F	I	G	N	F	E	E	R	A	P	N	K	E	A	L	D	A	A	K	E	L	L	E	Q	A	V	K	Q	A	Q	L	V	E	G	Y	K	L	L	G	H	R	Q	V	S	A	.	.	T	K	S	P	G	E	A	L	Y	A
Template Known Secondary structure			S	S	S	G	.	.	.	.	.	.	.	.	G	G		T	T							S	S			S	S	S																				T	T	S										G	G	G	T	S	S	.	.	S		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																																																								.	.
Template SS confidence
		96	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.
					170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	W	A	R	F	R	V	L	V
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		L	I	Q	Q	W	P	N	W	S	E	E	M
Template Known Secondary structure				T	T	S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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