Job Description P75925 Confidence 96.87% Date Thu Jan 5 12:16:05 GMT 2012 Rank 5 Aligned Residues 142 % Identity 18% Template d1q90b_ SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Resolution 3.10

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	A	I	I	V	Y	G	M	F	A	L	G	L	W	M	V	T	L	S	Y	Y	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Y	H	K	A	P	E	L	H	K	S	I	G	I	L	L	M	M	G	L	V	I	R	V	L	W	R	V	I	S	P	P	P	G	P	L	P	S	Y	S	P
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	F	T	C	F	L	V	Q	V	A	T	G	F	A	M	T	F	Y	Y	R	P	T	V	A	E	A	F	A	S	V	Q	Y	I	M	T	D	V	N	F	G	W	L	I	R	S	I	H	R	W	S	A	S	M	M	V	L	M	M	V	L	H	V	F	R	V	Y	L	T	G	G	F	K	R	P	R	E	L	T	W
Template Known Secondary structure																		T	T	T				S	T	T	T											T	S	T	T																												T	T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																.	.	.	.	.	.	140	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		M	T	R	L	A	A	R	A	G	H	L	A	L	Y	L	L	L	F	A	I	G	I	S	G	Y	L	I	S	T	A	D	G	K	P	I	S	V	F	G	W	F	D	V	P	A	T	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	Q	A	D	F	A	G	A	L	H	.	F	W	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence					.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		V	T	G	.	.	.	.	.	.	.	V	I	M	A	V	C	T	V	S	F	G	V	T	G	Y	S	L	P	W	D	Q	V	G	Y	W	A	V	K	I	V	T	G	V	P	D	A	I	P	G	V	G	G	F	I	V	E	L	L	R	G	G	V	G	V	G	Q	A	T	L	T	R	F	Y	S	L	H	T	F	V	L
Template Known Secondary structure					.	.	.	.	.	.	.																	T	T															G	G	G	G	S	T	T											T	S	S	S	S	S													T
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		119	120	.								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	S	V	V	V	L	S	V	M	H	G	F	M	A	L	K	H	H	F	I	D	K	D	D	T
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		P	L	L	T	A	V	F	M	L	M	H	F	L	M	.	.	.	.	.	.	I	R	K	Q	G	I
Template Known Secondary structure																.	.	.	.	.	.						S
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions