Job Description P75925 Confidence 96.51% Date Thu Jan 5 12:16:05 GMT 2012 Rank 6 Aligned Residues 151 % Identity 16% Template d1ppjc2 SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Resolution 2.10

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	A	I	I	V	Y	G	M	F	A	L	G	L	W	M	V	T	L	S	Y	Y	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Y	H	K	A	P	E	L	H	K	S	I	G	I	L	L	M	M	G	L	V	I	R	V	L	W	R	V	I	S	P	P	P	G	P	L	P	S	Y	S	P
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		L	L	G	I	C	L	I	L	Q	I	L	T	G	L	F	L	A	M	H	Y	T	S	D	T	T	T	A	F	S	S	V	T	H	I	C	R	D	V	N	Y	G	W	I	I	R	Y	M	H	A	N	G	A	S	M	F	F	I	C	L	Y	M	H	V	G	R	G	L	Y	Y	G	S	Y	T	F	L	E	T	.	.	.
Template Known Secondary structure																			T	T					T	T	T												S	T	T																														T	G	G	G	S				.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	R	L	A	A	R	A	G	H	L	A	L	Y	L	L	L	F	A	I	G	I	S	G	Y	L	I	S	T	A	D	G	K	P	I	S	V	F	G	W	F	D	V	P	A	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	G	A	Q	A	D	F	A	G	A	L	H	F	W	L	A
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		W	N	I	G	.	.	.	.	.	.	V	I	L	L	L	T	V	M	A	T	A	F	M	G	Y	V	L	P	W	G	Q	M	S	F	W	G	A	T	V	I	T	N	L	L	S	A	I	P	Y	I	G	T	N	L	V	E	W	I	W	G	G	F	S	V	D	K	A	T	L	T	R	F	F	A	F	H	F	I	L	P
Template Known Secondary structure						.	.	.	.	.	.																	T	T		B												G	G	G	G	G	S	T	T	T										T	S	S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		113	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	V	V	V	L	S	V	M	H	G	F	M	A	L	K	H	H	F	I	D	K	D	D	T	L	K	R	M	L	G	K	S	S	S	D
Query Conservation
Alig confidence															.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		F	I	I	M	A	I	A	M	V	H	L	L	F	.	.	.	.	.	.	L	H	E	T	G	S	N	N	P	T	G	I	S	S	D	V	D
Template Known Secondary structure															.	.	.	.	.	.									T	T		S			T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions