Job Description P22787 Confidence 99.60% Date Thu Jan 5 11:39:10 GMT 2012 Rank 36 Aligned Residues 207 % Identity 27% Template c3pvsA_ PDB info PDB header:recombination Chain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa Resolution 2.50 Å

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		190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		L	S	D	V	I	G	Q	E	Q	G	K	.	.	.	.	.	R	G	L	E	I	T	A	A	G	G	H	N	L	L	L	I	G	P	P	G	T	G	K	T	M	L	A	S	R	I	N	G	L	L	P	D	L	S	N	E	E	A	L	E	S	A	A	I	L	S	L	V	N	A	E	S	V	Q	K	Q	W	R	Q	R
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A
Template Known Secondary structure		T	T	T			S						S	T	T	S									T										S	T	T	S	S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																													.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	R	S	P	H	H	S	A	S	L	T	A	M	V	G	G	G	A	I	P	G	P	G	E	I	S	L	A	H	N	G	V	L	F	L	D	E	L	P	E	F	E	R	R	T	L	D	A	L	R	E	P	I	E	S	G	Q	I	H	L	S	R	T	R	A	K	I	T	Y	P	A	R	F	Q	L	V	A	A	M
Query Conservation
Alig confidence																																												.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	.	.	A	F	L	P	H	I	E	D	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	F	I	G	A	T
Template Known Secondary structure								T	T	T																			T	T									T	T	T			.	.	.	.	.	.								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.																.	130	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	S	P	T	G	H	Y	Q	G	N	H	N	R	C	T	P	E	Q	T	L	R	Y	L	N	R	L	S	G	P	F	L	D	R	F	D	L	S	L	E	I	P	L	P	P	P	G	I	L	S	K	T	V	V	P	G	E	S	S	A	T	V	K	Q	R	V	M	A	A	R	E	R	Q	F	K	R	Q	N	K	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	N	P	S	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	A	L	L	S	R	A	R	V	.	Y	L	L	K	S	L	S	T	E	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q
Template Known Secondary structure		S	S		G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						T	T				.												.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T	S	S	T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.																				.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170														.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.			480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		N	A	W	L	D	S	P	E	I	R	Q	F	C	K	L	E	S	E	D	A	M	W	L	E	G	T	L	I	H	L	G	L	S	I	R	A	W	Q	R	L	L	K	V	A	R	T	I	A	D	I	D	Q	S	D	I	.	.	I	T	R	Q	H	L	Q	E	A	V	S	Y	R
Query Conservation																																																									.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R
Template Known Secondary structure		S																.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																S		B		T	T	S														T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.															.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions