36 c3pvsA_ Probab=99.60   E-value=1.1e-14  Score=108.13  Aligned_columns=207  Identities=27%

Q ss_pred             HHHHCCCHHHH-----HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             55627978999-----9999884669837999189988989999999842421001123200001026887654345445
Q batch____       190 LSDVIGQEQGK-----RGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQR  264 (506)
Q Consensus       190 ~~dv~Gq~~ak-----ral~iAaag~h~iLL~G~PGtGKT~lAr~l~~ilp~l~~~e~~e~~~i~s~~g~~~~~~~~~~~  264 (506)
                      |.||+||+++.     -.-.+..-.-+|+||.||||||||++|+.++.-+                            ..
T Consensus        12 l~divGq~~~~~~~~~L~~~i~~~~~~slIL~GppGtGKTtlA~~iA~~~----------------------------~~   63 (414)
T c3pvsA_          12 LAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA----------------------------NA   63 (414)
T ss_dssp             TTTCCSCHHHHSTTSHHHHHHHHTCCCEEEEECSTTSSHHHHHHHHHHHT----------------------------TC
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC----------------------------CC
T ss_conf             75610829999889999999975999849997698898899999999971----------------------------99


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEEECC
Q ss_conf             10047765341123455212278730103587787636102399999999999853965704688158946980999725
Q batch____       265 PFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAM  344 (506)
Q Consensus       265 pfr~ph~~~s~~~l~gg~~~~~pG~i~lAh~GVLfLDEi~~~~~~vl~~Ll~~LEeg~v~i~r~g~~~~~Pa~f~lIaA~  344 (506)
                      +|.....+......+.....---.....+.+.|+|+||++.|      +||..||++.               +.+|+++
T Consensus        64 ~fi~ina~~~~v~~ir~ii~~a~~~~~~~~~~ILfIDEi~rl------aLL~~lE~~~---------------iilI~aT  122 (414)
T c3pvsA_          64 DVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRF------AFLPHIEDGT---------------ITFIGAT  122 (414)
T ss_dssp             EEEEEETTTCCHHHHHHHHHHHHHHHHTTCCEEEEEETTTCC------CCHHHHHTTS---------------CEEEEEE
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH------HHHHHHHCCC---------------EEEEEEE
T ss_conf             899997544798999999999875111258808998413576------6578754498---------------4899982


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             76433541577766898997787611763323432349997689837888863038897899887743999999620012
Q batch____       345 NPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKL  424 (506)
Q Consensus       345 NP~~~g~~~~~~~~~~~~~~~~~~~~ls~pLlDR~Dl~v~v~~~~~~~~~~~~~~~e~s~~~~~~v~~ar~~~~~r~~~~  424 (506)
                      |..+...                   +.++|++|+.. +.+..+..++.             .......-+.........
T Consensus       123 ten~~~~-------------------i~~aL~SR~~v-i~l~~ls~edi-------------~~il~~~l~~~~~~~~~~  169 (414)
T c3pvsA_         123 TENPSFE-------------------LNSALLSRARV-YLLKSLSTEDI-------------EQVLTQAMEDKTRGYGGQ  169 (414)
T ss_dssp             SSCGGGS-------------------SCHHHHTTEEE-EECCCCCHHHH-------------HHHHHHHHHCTTTSSTTS
T ss_pred             CCCCHHH-------------------CCHHHHHHEEE-EEECCCCHHHH-------------HHHHHHHHHHHHHHHCCC
T ss_conf             6760441-------------------69888830006-77168998999-------------999999999999870878


Q ss_pred             CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC--CCHHHHHHHHHHH
Q ss_conf             3247899999985208999999999998629898999999999999998708996--8899999999840
Q batch____       425 NAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDI--ITRQHLQEAVSYR  492 (506)
Q Consensus       425 n~~l~~~~l~~~v~l~~~a~~~l~~~~~~~~lS~R~~~~ilrvArtiAdL~g~~~--V~~~dv~eAl~~R  492 (506)
                      +..++...++..+..+              +-..|....+|..|-.+|..+....  ++.+.+.+++.-|
T Consensus       170 ~i~i~d~al~~Ia~~s--------------~GD~R~aLn~LE~a~~~a~~~~~~~~~i~~~~v~~~~~~~  225 (414)
T c3pvsA_         170 DIVLPDETRRAIAELV--------------NGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER  225 (414)
T ss_dssp             SEECCHHHHHHHHHHH--------------CSCHHHHHHHHHHHHHHSCBCTTSCEECCHHHHHHHHTCC
T ss_pred             CCCCCHHHHHHHHHHC--------------CCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHCC
T ss_conf             9866989999999857--------------9998999999999999514667665548999999986220