Job Description P0A6A6 Confidence 100.00% Date Thu Jan 5 11:02:42 GMT 2012 Rank 4 Aligned Residues 457 % Identity 25% Template c2b3yB_ PDB info PDB header:lyase Chain: B: PDB Molecule:iron-responsive element binding protein 1; PDBTitle: structure of a monoclinic crystal form of human cytosolic aconitase2 (irp1) Resolution 1.85 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.								.	.	.	.	.	.													.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.								.	.	.	.	.	.													.	.	.	.	.	.	.
Query Sequence		Y	E	K	L	F	D	A	H	V	V	Y	E	A	E	N	E	T	P	L	L	Y	I	D	R	H	L	V	H	E	V	T	S	P	Q	A	F	D	G	L	R	A	H	G	R	.	.	.	.	P	V	R	Q	P	G	K	.	.	.	.	.	.	T	F	A	T	M	D	H	N	V	S	T	Q	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.								.	.	.	.	.	.													.	.	.	.	.	.	.
Alig confidence														.																																.	.	.	.								.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		I	E	N	I	L	H	W	N	V	T	Q	H	.	K	N	I	E	V	P	F	K	P	A	R	V	I	L	Q	D	F	T	G	V	P	A	V	V	D	F	A	A	M	R	D	A	V	K	K	L	G	G	D	P	E	K	I	N	P	V	C	P	A	D	L	V	I	D	H	S	I	Q	V	D	F	N	R	R	A	D	S
Template Known Secondary structure							T					T	T	.	T	T								S																										T	T			G	G	G		S		S	S								S	S				S	S		S	S	T	T
Template Predicted Secondary structure														.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
			69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																															.	.	.	.	.	.	.	.	.
Query SS confidence		.																																															.	.	.	.	.	.	.	.	.
Query Sequence		.	T	K	D	I	N	A	C	G	E	M	A	R	I	Q	M	Q	E	L	I	K	N	C	K	E	F	G	V	E	L	Y	D	L	N	H	P	Y	Q	G	I	V	H	V	M	G	P	E	.	.	.	.	.	.	.	.	.	Q	G	V	T	L	P	G	M	T	I	V	C	G	D	S	H	T	A	T	H	G	A	F	G
Query Conservation		.																																															.	.	.	.	.	.	.	.	.
Alig confidence		.																										.	.																				.	.	.	.	.	.	.	.	.								.
Template Conservation																												.	.																																				.
Template Sequence		L	Q	K	N	Q	D	L	E	F	E	R	N	R	E	R	F	E	F	L	K	W	G	S	Q	A	F	.	.	H	N	M	R	I	I	P	P	G	S	G	I	I	H	Q	V	N	L	E	Y	L	A	R	V	V	F	D	Q	D	G	Y	Y	Y	P	D	.	S	L	V	G	T	D	S	H	T	T	M	I	D	G	L	G
Template Known Secondary structure																											S	.	.	T	T						T	T	S										T	T			S					T	T						.					S	S	G	G	G	G	G	G	G	G	G	T
Template Predicted Secondary structure																												.	.																																				.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	F	G	I	G	T	S	E	V	E	H	V	L	A	T	Q	T	L	K	Q	G	R	A	K	T	M	K	I	E	V	Q	G	K	A	A	P	G	I	T	A	K	D	I	V	L	A	I	I	G	K	T	G	S	A	G	G	T	G	H	V	V	E	F	C	G	E	A	I	R	D	L	S	M	E	G	R	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	G	W	G	V	G	G	I	E	A	E	A	V	M	L	G	Q	P	I	S	M	V	L	P	Q	V	I	G	Y	R	L	M	G	K	P	H	P	L	V	T	S	T	D	I	V	L	T	I	T	K	H	L	R	Q	V	G	V	V	G	K	F	V	E	F	F	G	P	G	V	A	Q	L	S	I	A	D	R	A	T
Template Known Secondary structure																	T	T																	S				T	T																				T	T							S	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		L	C	N	M	A	I	E	M	G	A	K	A	G	L	V	A	P	D	E	T	T	F	N	Y	V	K	G	R	L	H	A	P	K	G	K	D	F	D	D	A	V	A	Y	W	K	T	L	Q	.	.	.	.	.	T	D	E	G	A	T	F	D	T	V	V	T	L	Q	A	E	E	I	S	P	Q	V	T	W	G	T	N
Query Conservation																																																		.	.	.	.	.
Alig confidence																																																		.	.	.	.	.
Template Conservation
Template Sequence		I	A	N	M	C	P	E	Y	G	A	T	A	A	F	F	P	V	D	E	V	S	I	T	Y	L	V	Q	T	G	R	D	E	E	K	L	K	Y	I	K	K	Y	L	Q	A	V	G	M	F	R	D	F	N	D	P	S	Q	D	P	D	F	T	Q	V	V	E	L	D	L	K	T	V	V	P	C	C	S	G	P	K	R
Template Known Secondary structure					T					T		S																	T	T																	T					T	T		G	G	G					S							G	G	G								S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.									.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.																																																	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.																																																	.	.	.
Query Sequence		P	G	Q	V	I	S	V	N	D	N	I	P	D	P	A	S	F	A	D	P	V	.	.	.	.	.	.	.	.	E	R	A	S	A	E	K	A	L	A	Y	M	G	L	K	P	G	I	P	L	T	E	V	A	I	D	K	V	F	I	G	S	C	T	N	S	R	I	E	D	L	R	A	A	A	E	I	A	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.																																																	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																																	.	.	.
Template Conservation
Template Sequence		P	Q	D	K	V	A	V	S	D	M	K	K	D	F	E	S	C	L	G	A	K	Q	G	F	K	G	F	Q	V	A	P	E	H	H	N	D	H	K	T	F	I	Y	D	N	T	E	F	T	L	A	H	G	S	V	V	I	A	A	I	T	S	C	T	N	T	S	N	P	S	V	M	L	G	A	G	L	L	A	K	K
Template Known Secondary structure		T	T					G	G	G											S		S	B	T	T	B					G	G	G	T	T								T	T							T	T	B													T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
					363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.											.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	K	G	R	K	V	A	P	G	V	Q	A	L	V	V	P	G	S	G	P	V	K	A	Q	A	E	A	E	G	L	D	K	I	F	I	E	A	G	F	E	W	R	L	P	G	C	S	M	C	L	A	M	N	N	D	R	L	N	P	G	E	.	.	.	.	.	.	.	.	.	.	R	C	A	S	T	S	N
Query Conservation		.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	D	A	G	L	N	V	M	P	Y	I	K	T	S	L	S	P	G	S	G	V	V	T	Y	Y	L	Q	E	S	G	V	M	P	Y	L	S	Q	L	G	F	D	V	V	G	Y	G	C	M	T	C	I	G	N	S	G	P	L	P	E	P	V	V	E	A	I	T	Q	G	D	L	V	A	V	G	V	L	S	G	N
Template Known Secondary structure					T	T					T	T	S							S	S										T	T									T			B			S	S		G	G	G	G	T																	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
		430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		R	N	F	E	G	R	Q	G	.	R	G	G	R	T	H	L	V	S	P	A	M	A	A	A	A	A	V	T	G	H	F	A	D	I	R	N	I	K
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		R	N	F	E	G	R	V	H	P	N	T	R	A	N	Y	L	A	S	P	P	L	V	I	A	Y	A	I	A	G	T	I	R	I	D	F	E	K	E
Template Known Secondary structure					T	T	S	S		T	T		S																		B	S				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.