Phyre 2 alignment of P51981 with c3tj4B

Job Description P51981
Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012

Rank 66 Aligned Residues 305

% Identity 23% Template c3tj4B_

PDB info PDB header:lyase Chain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of an enolase from agrobacterium tumefaciens (efi2 target efi-502087) no mg

Resolution 1.50 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence	M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																					.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.													.														.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence	I	T	A	V	E	P	F	I	L	H	L	P	L	.	.	.	.	.	.	.	.	.	.	.	T	H	W	G	V	V	G	A	K	I	T	T	S	D	G	I	E	G	Y	G	F	T	G	T	H	A	.	H	L	P	S	D	R	L	I	T	S	C	I	S	D	C	Y	A	P	L	L	L	G	E	D	A	S	D	H	S
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.													T	T	S												.															T	T					T	T	S	B	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.												.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

	80	.	.	.																	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence	K	I	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	.	.	.	.	G	T	P	D	Q	M	A	N	S	A	S	T
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation
Template Sequence	R	L	W	T	K	L	A	R	Y	P	S	L	Q	W	V	G	R	A	G	I	T	H	L	A	L	A	A	V	D	V	A	L	W	D	I	K	A	K	K	A	G	V	P	L	W	H	Y	L	G	G	A	R	T	A	G	V	E	A	Y	N	T	D	I	G	W	L	S	F	T	L	E	D	L	L	A	G	S	A	R	A
Template Known Secondary structure								T							T		S	S	S																						T	S	B					T	T			S		S								T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure														.	.	.																		.
Query SS confidence														.	.	.																		.
Query Sequence	L	W	Q	A	G	A	K	L	L	K	V	K	L	.	.	.	D	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N
Query Conservation														.	.	.																		.
Alig confidence														.	.	.																		.
Template Conservation
Template Sequence	V	E	E	D	G	F	T	R	L	K	I	K	V	G	H	D	D	P	N	I	D	I	A	R	L	T	A	V	R	E	R	V	D	S	A	V	R	I	A	I	D	G	N	G	K	W	D	L	P	T	C	Q	R	F	C	A	A	A	K	D	L	D	I	Y	W	F	E	E	P	L	W	Y	D	D	V	T	S	H	A	R
Template Known Secondary structure			T	T												S	S															S		T	T								T	T														T	T	T	S							S		S		T	T
Template Predicted Secondary structure
Template SS confidence
	163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

	216	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure			.	.																						.	.
Query SS confidence			.	.																						.	.
Query Sequence	F	I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P
Query Conservation			.	.																						.	.
Alig confidence			.	.																						.	.																																										.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence	L	A	R	N	T	S	I	P	I	A	L	G	E	Q	L	Y	T	V	D	A	F	R	S	F	I	D	A	G	A	V	A	Y	V	Q	P	D	V	T	R	L	G	G	I	T	E	Y	I	Q	V	A	D	L	A	L	A	H	R	L	P	V	V	P	H	A	G	E	M	S	.	.	.	.	Q	V	H	V	H	L	S	Y
Template Known Secondary structure						S	S						T	T			S										T	T			S						T	T	T	T	T															T	T			B					T	T	T	T	.	.	.	.	T	T
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
	243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.

	292	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence	Q	V	S	F	A	D	L	D	G	P	.	T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence	W	H	P	A	S	T	I	L	E	Y	I	P	W	I	K	D	H	F	E	E	P	I	H	V	R	D	G	V	Y	K	R
Template Known Secondary structure			T	T	B								S	S	G	G	G	B	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
	319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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