Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 10 Aligned Residues 320 % Identity 33% Template c3ritE_ PDB info PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from methylococcus capsulatus2 complexed with mg and dipeptide l-arg-d-lys Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																.
Query SS confidence																																						.																.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	.	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L
Query Conservation																																						.																.
Alig confidence																																						.																.
Template Conservation
Template Sequence		I	A	D	I	Q	V	R	T	E	H	F	P	L	T	R	P	Y	R	I	A	F	R	S	I	E	E	I	D	N	L	I	V	E	I	R	T	A	D	G	L	L	G	L	G	A	A	S	P	E	R	H	V	T	G	E	T	L	E	A	C	H	A	A	L	D	H	D	R	L	G	W	L	M	G	R	D	I	R	T	L
Template Known Secondary structure																					T	T																T	T	S																									T		T	T	T	T	G	G	G	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		Q	K	I	L	.	.	.	.	.	.	.	.	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																.
Template Conservation																																													.
Template Sequence		P	R	L	C	R	E	L	A	E	R	L	P	A	A	P	A	A	R	A	A	L	D	M	A	L	H	D	L	V	A	Q	C	L	G	L	P	L	V	E	I	L	G	R	.	A	H	D	S	L	P	T	S	V	T	I	G	I	K	P	V	E	E	T	L	A	E	A	R	E	H	L	A	L	G	F	R	V	L	K	V
Template Known Secondary structure												S	T	T																					T	S	B					S			.	S		S				B						S																T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		151	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.
Predicted Secondary structure				.	.																		.																																																			.	.
Query SS confidence				.	.																		.																																																			.	.
Query Sequence		K	L	.	.	D	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	H	P	.	.	L	P	I	C	A	D
Query Conservation				.	.																		.																																																			.	.
Alig confidence				.	.																		.																																																			.	.
Template Conservation
Template Sequence		K	L	C	G	D	E	E	Q	D	F	E	R	L	R	R	L	H	E	T	L	A	G	R	A	V	V	R	V	D	P	N	Q	S	Y	D	R	D	G	L	L	R	L	D	R	L	V	Q	E	L	G	I	E	F	I	E	Q	P	F	P	A	G	R	T	D	W	L	R	A	L	P	K	A	I	R	R	R	I	A	A	D
Template Known Secondary structure					S																S	S	S	S	S							T	T																		T								S		T	T							T	S							T				S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		226	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.
Predicted Secondary structure															.	.	.																																																										.	.	.
Query SS confidence															.	.	.																																																										.	.	.
Query Sequence		E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	.	.	.	A	D	L	D
Query Conservation															.	.	.																																																										.	.	.
Alig confidence															.	.	.																																																										.	.	.
Template Conservation
Template Sequence		E	S	L	L	G	P	A	D	A	F	A	L	A	A	P	P	A	A	C	G	I	F	N	I	K	L	M	K	C	G	G	L	A	P	A	R	R	I	A	T	I	A	E	T	A	G	I	D	L	M	W	G	C	M	D	E	S	R	I	S	I	A	A	A	L	H	A	A	L	A	C	P	A	T	R	Y	L	D	L	D
Template Known Secondary structure		T	T			S									S	S	S		S		S										T	S															T									S															T		T	T							G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	P	T	W	L	A	V	D	V	E	.	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		G	S	F	D	L	A	R	D	V	A	E	G	G	F	I	L	E	D	G	R	L	R	V
Template Known Secondary structure		G	G	T	T	B	S			S				S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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