Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 85 Aligned Residues 311 % Identity 18% Template c3n6jA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from actinobacillus succinogenes 130z Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	.	E	E	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																				.
Alig confidence																																				.														.	.	.	.	.	.	.											.
Template Conservation																																																		.	.	.	.	.	.	.											.
Template Sequence		I	T	D	X	K	V	I	P	V	A	G	H	D	S	X	L	X	N	V	G	G	A	H	S	P	Y	F	T	R	N	I	V	I	L	T	D	N	S	G	H	T	G	V	G	E	A	P	G	.	.	.	.	.	.	.	G	A	T	I	E	N	A	L	T	E	.	A	I	P	H	V	V	G	R	P	I	S	I	L	N
Template Known Secondary structure																	B			T	T					S												T	T											.	.	.	.	.	.	.	S									T	.	T	G	G	G	T	T	T		B	G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.											.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.	.																								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.	.	.	.	.
Query Sequence		K	I	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	.	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	V	N	D	X	H	N	G	Y	L	D	A	D	Y	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	X	G	Q	F	L	G	V	P	V	A	E	L	L	G	P	G	K	Q	R	D	E	V	T	V	L	G	Y	L	F	Y	V	G	D	D	K	I	T	D
Template Known Secondary structure																						S			T	T	S	S	T																				T	S	B	G	G	G	T	S	T	T					S				B							B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																								129	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	.	G	A	K	L	L	K	V	K	L	D	N	.	.	.	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	D	A	T	L	I	V	D	A	N	E	S	W	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.
Template Conservation
Template Sequence		L	P	Y	Q	Q	P	V	T	G	K	H	E	W	Y	D	I	R	R	K	K	A	X	D	T	Q	A	V	I	E	L	A	A	A	S	K	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	F	E	G	S	K	E	I	D	T	V	I	E	L	K	K	H	F	P	D	A	R	I	T	L	D	P	N	G	C	W	S
Template Known Secondary structure		S								S	S							T	T	S		B		S																		S							S	S	S																	S	S	S							T	T	B	B
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																													.	.	.	.									.	.																						.	.
Query SS confidence																													.	.	.	.									.	.																						.	.
Query Sequence		A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	.	.	.	.	D	A	A	L	E	N	F	I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L
Query Conservation																													.	.	.	.									.	.																						.	.
Alig confidence																.													.	.	.	.									.	.																						.	.											.
Template Conservation																.																																																												.
Template Sequence		L	D	E	A	I	Q	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	I	G	E	N	G	Y	S	G	R	E	I	X	A	E	F	R	R	R	T	G	I	P	T	A	T	N	X	I	A	T	N	W	R	E	X	C	H	A	I	X	L	Q	S	V	D	I	P	L	A	D	P	.	H	F	W	T	L
Template Known Secondary structure										T	T		T	T	T	.		S				S		B			B	T	T	B																				S	S	S			S											T			S			B				.
Template Predicted Secondary structure																.																																																												.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																											.	.	.	.													.	.
Query SS confidence																																											.	.	.	.													.	.
Query Sequence		T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	.	.	.	.	A	D	L	D	G	P	T	W	L	A	V	D	.	.	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation																																											.	.	.	.													.	.
Alig confidence																																											.	.	.	.													.	.
Template Conservation
Template Sequence		T	G	A	S	R	V	A	Q	L	C	N	E	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	X	F	S	H	V	G	A	A	A	P	G	N	P	T	A	L	D	T	H	W	I	W	Q	E	G	D	F	Y	L	T	K	N	P	L	E	I	K	D	G	K	I	K	L
Template Known Secondary structure															T				B					S															T			S					B								T	T	T			S	B	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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