Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 71 Aligned Residues 302 % Identity 22% Template c3n4eA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, c-terminal PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from paracoccus denitrificans pd1222 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																						.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.											.															.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		I	A	K	V	E	A	L	S	V	A	X	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	S	A	F	V	R	I	T	A	E	D	G	T	V	G	W	G	E	A	S	P	X	L	G	.	.	.	.	G	I	A	S	L	G	V	V	A	R	D	I	A	P	F	L	E	G	Q	E	V	L	D	H	A
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S										G	G	G	.	.	.	.	G										T	T					T	T	S	B	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.															.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		80	.	.	.	.															.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query Sequence		K	I	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	.	.	.	.	P	D	Q	M	A	N	S	A	S	T	L	W
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation
Template Sequence		V	L	L	D	R	X	X	H	R	L	V	K	L	G	P	E	G	I	A	T	A	A	L	A	A	C	D	I	A	L	W	D	L	K	G	K	L	L	G	Q	P	I	Y	K	L	L	G	G	A	W	R	T	R	L	P	C	Y	S	S	I	G	G	N	A	A	R	S	V	D	E	V	V	R	E	V	A	R	R	V	E
Template Known Secondary structure											S	G	G	G			T	T																						T	S	B					T	T			S		S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		142	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																		.
Query SS confidence													.	.	.	.	.	.	.	.	.																		.
Query Sequence		Q	A	G	A	K	L	L	K	V	K	L	.	.	.	.	.	.	.	.	.	D	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A
Query Conservation													.	.	.	.	.	.	.	.	.																		.
Alig confidence													.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		A	E	Q	P	A	A	V	K	I	R	W	D	G	D	R	T	R	C	D	V	D	I	P	G	D	I	A	K	A	R	A	V	R	E	L	L	G	P	D	A	V	I	G	F	D	A	N	N	G	Y	S	V	G	G	A	I	R	V	G	R	A	L	E	D	L	G	Y	S	W	F	E	E	P	V	Q	H	Y	H	V	G
Template Known Secondary structure						S										T	T			S																			S	S								T	T																	T	T		S						S		T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		212	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																						.
Query SS confidence								.	.																						.
Query Sequence		A	L	E	N	F	I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P
Query Conservation								.	.																						.
Alig confidence								.	.																						.																																						.
Template Conservation																																																																					.
Template Sequence		A	X	G	E	V	A	Q	R	L	D	I	T	V	S	A	G	E	Q	T	Y	T	L	Q	A	L	K	D	L	I	L	S	G	V	R	X	V	Q	P	D	I	V	K	X	G	G	I	T	G	X	X	Q	C	A	A	L	A	H	A	H	G	V	E	F	V	P	H	Q	.	T	Q	P	G	V	G	H	F	A	N	I	H
Template Known Secondary structure											S	S				B		T	T			S											T								T	T	T	T	T																T								.			S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.
		289	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure									.	.	.	.															.
Query SS confidence									.	.	.	.															.
Query Sequence		L	V	P	Q	V	S	F	.	.	.	.	A	D	L	D	G	P	T	W	L	A	V	D	V	E	.	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation									.	.	.	.															.
Alig confidence									.	.	.	.															.
Template Conservation
Template Sequence		V	L	S	T	L	X	H	X	T	K	P	V	E	L	A	D	R	W	D	R	G	R	P	V	F	R	N	P	A	E	P	V	D	G	H	F	A	L
Template Known Secondary structure					T		T	T			S						T	T	G	G	G	G	T	T	T	B	S	S					B	T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions