Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 76 Aligned Residues 315 % Identity 19% Template c3mznA_ PDB info PDB header:lyase Chain: A: PDB Molecule:glucarate dehydratase; PDBTitle: crystal structure of probable glucarate dehydratase from2 chromohalobacter salexigens dsm 3043 Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	.	E	E	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																				.
Alig confidence																																				.																	.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		I	T	K	M	N	V	V	P	V	A	G	E	D	G	F	L	L	N	L	S	G	G	H	E	P	W	F	I	R	C	V	L	V	L	E	D	E	S	G	N	R	G	V	G	E	I	P	S	S	E	G	.	.	.	.	I	L	N	G	L	E	K	C	R	S	L	V	E	G	A	R	V	N	E	V	K	Q	V	L	S
Template Known Secondary structure																	B			T	T					S												T	T	S													.	.	.	.								T					T	T		B	G	G	G
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.																				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	.	.	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	R	G	L	L	A	Q	G	G	P	E	E	R	G	R	Q	T	F	D	L	R	V	A	V	H	V	I	T	A	I	E	S	A	L	F	D	L	F	G	Q	A	L	G	M	P	V	A	D	L	L	G	Q	Y	G	R	Q	R	D	E	V	E	A	L	G	Y	L	F	L	L	G	D	P	D	K	T	D	L	P	Y
Template Known Secondary structure								G	G	G							S	S	S	S				S																					T		B	G	G	G	G	S	T	T	T					S				B							B			G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
																			127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	.	G	A	K	L	L	K	V	K	L	D	N	.	.	.	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.												.	.	.
Template Conservation
Template Sequence		P	R	V	A	D	P	V	D	A	W	D	E	V	R	Y	R	E	A	M	T	P	E	A	V	A	N	L	A	R	A	A	Y	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	R	G	E	E	E	A	D	C	I	R	A	L	H	E	A	F	P	E	A	R	L	A	L	D	P	N	G	A	W	K	L	D	E
Template Known Secondary structure					S	S			S						T	T	S		B		S																		S							S	S	S																	T	T	S							T	T		B
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.								.	.																						.	.
Query SS confidence																											.	.	.	.								.	.																						.	.
Query Sequence		L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	.	.	.	.	A	A	L	E	N	F	I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A
Query Conservation																											.	.	.	.								.	.																						.	.
Alig confidence												.															.	.	.	.								.	.																						.	.											.
Template Conservation												.																																																													.
Template Sequence		A	V	R	V	L	E	P	I	K	H	.	L	L	S	Y	A	E	D	P	C	G	Q	E	G	G	F	S	G	R	E	T	M	A	E	F	K	K	R	T	G	L	P	T	A	T	N	M	I	A	T	D	Y	K	Q	L	Q	Y	A	V	Q	L	N	S	V	D	I	P	L	A	D	C	.	H	F	W	T	M	Q	G	A
Template Known Secondary structure							G	G	G	G	G	.	G		S				S	S	B			B	T	T	B																				S	S	S	S	S	S											T			S			B				.
Template Predicted Secondary structure												.																																																													.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																								.	.	.	.															.
Query SS confidence																																								.	.	.	.															.
Query Sequence		L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	.	.	.	.	A	D	L	D	G	P	T	W	L	A	V	D	V	E	.	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation																																								.	.	.	.															.
Alig confidence																																								.	.	.	.															.
Template Conservation
Template Sequence		V	A	V	G	E	L	C	N	E	W	G	M	T	W	G	S	H	S	N	N	H	F	D	I	S	L	A	M	M	T	H	V	A	A	A	C	P	G	E	I	T	A	I	D	T	H	W	I	W	Q	D	G	Q	R	I	T	R	E	P	F	Q	I	R	D	G	K	L	T	V
Template Known Secondary structure											T	T				B					S															T			S					B								T	T			S	B	S	S					B	T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions