Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 72 Aligned Residues 307 % Identity 19% Template c3mqtV_ PDB info PDB header:isomerase Chain: V: PDB Molecule: PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from shewanella pealeana Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																						.														.	.
Query SS confidence																																						.														.	.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	.	.	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E
Query Conservation																																						.														.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.												.														.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	S	V	E	F	I	P	V	N	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	N	T	V	I	V	K	V	T	D	E	N	G	V	Y	G	L	G	E	A	D	G	P	P	E	C	M	K	A	F	S	E	I	E	N	E	H	K	W	L	N	N	I	K	E	A	V	I	G	R	D	P	L	E
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S									S									T	T					B	T	T	B			G	G	G	G	T	T	T	S		T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.														.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		78	.	80	.	.															.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	K	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	.	.	.	.	.	.	.	.	.	T	P	D	Q	M	A
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	A	N	Y	N	R	M	Y	D	T	T	K	W	I	G	M	R	G	L	G	L	F	A	I	S	G	I	D	M	A	L	Y	D	L	A	G	K	Q	L	G	V	P	A	Y	K	L	M	G	G	A	Q	K	A	Q	L	T	P	Y	F	T	L	Y	P	S	V	A	A	D	A	T	L	S	E	I	V	E	A	Y	K
Template Known Secondary structure													T	T	T	T		S	S	T																						T		B					T	T				S	S		B												T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																.														.
Query SS confidence																						.	.	.	.	.	.																.														.
Query Sequence		N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	D	N	.	.	.	.	.	.	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	.	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P
Query Conservation																						.	.	.	.	.	.																.														.
Alig confidence																						.	.	.	.	.	.																.														.
Template Conservation
Template Sequence		P	L	I	A	K	A	K	E	R	G	A	K	A	V	K	V	C	I	I	P	N	D	K	V	S	D	K	E	I	V	A	Y	L	R	E	L	R	E	V	I	G	W	D	M	D	M	M	V	D	C	L	Y	R	W	T	D	W	Q	K	A	R	W	T	F	R	Q	L	E	D	I	D	L	Y	F	I	E	A	C	L	Q
Template Known Secondary structure										T	T		S										T	T	S																		S	S	S							T	T			S												G	G	G	G			S				S		S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure													.	.																						.	.
Query SS confidence													.	.																						.	.
Query Sequence		A	Q	D	D	A	A	L	E	N	F	I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A
Query Conservation													.	.																						.	.
Alig confidence													.	.																						.	.																																							.
Template Conservation																																																																												.
Template Sequence		H	D	D	L	I	G	H	Q	K	L	A	A	A	I	N	T	R	L	C	G	A	E	M	S	T	T	R	F	E	A	Q	E	W	L	E	K	T	G	I	S	V	V	Q	S	D	Y	N	R	C	G	G	V	T	E	L	L	R	I	M	D	I	C	E	H	H	N	A	Q	L	M	P	H	N	W	.	K	T	G	I	T
Template Known Secondary structure		T	T												S	S	S						T	T																	S						T	T	T	S	S															T	T									.	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.									.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		I	S	A	A	L	P	L	V	P	Q	V	S	F	A	D	L	.	.	.	.	.	.	.	.	D	G	P	T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	A	R	H	F	G	I	V	C	H	I	S	E	Y	V	E	Y	L	H	P	D	F	W	N	G	T	L	T	Q	Q	L	T	L	N	E	P	K	I	I	D	G	A	I	E	V
Template Known Secondary structure													T	T		S							G	G	G									S	B	S						B	T	T	B	B
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions