Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 80 Aligned Residues 311 % Identity 21% Template c3mkcA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:racemase; PDBTitle: crystal structure of a putative racemase Resolution 1.77 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																													.																												.	.																						.	.
Query SS confidence																													.																												.	.																						.	.
Query Sequence		A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	.	.	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q	K	I	L	P	A	.	.
Query Conservation																													.																												.	.																						.	.
Alig confidence																													.																												.	.																						.	.
Template Conservation
Template Sequence		A	V	A	P	I	K	S	I	E	F	I	P	V	N	Y	Q	S	Q	N	T	V	V	V	K	V	T	D	E	N	G	V	Y	G	L	G	E	A	D	G	S	P	D	A	I	L	A	Y	A	N	I	E	T	E	H	K	W	L	T	N	I	T	E	K	A	I	G	R	L	P	I	E	I	N	A	I	W	D	A	X	Y
Template Known Secondary structure		T																											T	T	S									S										T					B	T	T	B			T	T	T	T	T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
														85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	.	.	.	.	.	.	.	.	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	T	Q	W	Q	G	X	R	G	L	G	X	F	A	L	S	G	I	D	X	A	L	Y	D	L	A	G	K	Q	L	G	V	P	A	Y	Q	L	L	G	G	T	N	K	D	K	V	H	P	Y	L	T	L	Y	P	A	I	P	D	A	S	L	D	V	A	I	K	G	Y	A	P	L	L	E	K	A	K	A	H	N
Template Known Secondary structure				T					S	S	T																						T		B					T	T			S		S											S																							T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		145	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																	.														.
Query SS confidence											.	.	.	.	.	.																	.														.
Query Sequence		A	K	L	L	K	V	K	L	D	.	.	.	.	.	.	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	.	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F
Query Conservation											.	.	.	.	.	.																	.														.
Alig confidence											.	.	.	.	.	.																	.														.
Template Conservation
Template Sequence		I	R	A	V	K	V	C	V	P	I	K	A	D	W	S	T	K	E	V	A	Y	Y	L	R	E	L	R	G	I	L	G	H	D	T	D	X	X	V	D	Y	L	Y	R	F	T	D	W	Y	E	V	A	R	L	L	N	S	I	E	D	L	E	L	Y	F	A	E	A	T	L	Q	H	D	D	L	S	G	H	A	K	L
Template Known Secondary structure			S								T	T																					S	S	S							T	T															T	G	G	G			S				S		S		T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		217			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure			.	.																						.	.
Query SS confidence			.	.																						.	.
Query Sequence		I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q
Query Conservation			.	.																						.	.
Alig confidence			.	.																						.	.																																							.
Template Conservation																																																																		.
Template Sequence		V	E	N	T	R	S	R	I	C	G	A	E	X	S	T	T	R	F	E	A	E	E	W	I	T	K	G	K	V	H	L	L	Q	S	D	Y	N	R	C	G	G	L	T	E	L	R	R	I	T	E	X	A	T	A	N	N	V	Q	V	X	P	H	N	W	.	K	T	G	I	T	S	A	A	A	I	H	Y	Q	F	A
Template Known Secondary structure						S	S		B				T	T													T	T			S						T	T	T	T	T															T	T									.	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		293	.	.	.	.	.									.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		V	S	F	A	D	L	.	.	.	.	.	.	.	.	D	G	P	T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	N	A	P	Y	F	E	Y	V	H	P	E	F	C	D	G	E	L	R	K	Y	L	V	T	P	E	A	E	L	V	D	G	G	F	A	K
Template Known Secondary structure		T			S	S							G	G	G									S								B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions