Job Description P51981 Confidence 50.50% Date Thu Jan 5 12:04:52 GMT 2012 Rank 234 Aligned Residues 178 % Identity 16% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	D	N	.	.	.	.	.	.	.	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	D	A	T	L	I	V	D	A	N	E	S	W	.	.	.	.	.	.	.	R	A
Query Conservation																																							.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	K	I	I	V	S	L	M	G	K	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	F	A	N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	L	T	T
Template Known Secondary structure		S										S	S												T	T	S			S						G	G	G		T	T	T	T																		S	S									G	G	G	T		S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Query SS confidence																.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Query Sequence		E	G	L	A	A	R	C	Q	L	L	A	D	L	G	.	V	A	M	.	.	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	.	.	I	H	P	L	P	I	C	A	D	E	S	.	.	.	.	C	H	T	R	S	N	L	K	A	L	K	G	.	.	.	.	.	R	Y	E	M	V	N	I	K	L	D
Query Conservation																.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Alig confidence																.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N	H	D	F	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I	P	K	I	A	V	M
Template Known Secondary structure															S			S						G	G	G															T	T										S	S																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.														.
Query SS confidence																				.	.	.	.	.														.
Query Sequence		K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	.	.	.	.	.	G	F	S	L	M	L	G	C	M	L	C	T	S	.	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	A
Query Conservation																				.	.	.	.	.														.
Alig confidence				.																.	.	.	.	.														.
Template Conservation				.
Template Sequence		P	Q	.	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	I	T	M	S	M	S	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G
Template Known Secondary structure			S	.	S																		T		S	S								T	G	G	G	T
Template Predicted Secondary structure				.
Template SS confidence
		175	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions