Job Description P51981 Confidence 60.17% Date Thu Jan 5 12:04:52 GMT 2012 Rank 226 Aligned Residues 185 % Identity 11% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																									.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	D	N	.	.	.	.	.	.	.	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	D	A	T	L	I	V	D	A	N	E	S	W	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	R	P	K	I	C	V	P	I	I	G	K	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D	I	P	L	L	F	T	F	R	S	V	V	E	G	G	E	K	L	I
Template Known Secondary structure		S	S	S										S	S											T	T	T	S	S		S						G	G	G		T	T	T	T																	T	T	S									G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.
Predicted Secondary structure																		.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Query SS confidence																		.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Query Sequence		R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	.	V	A	M	.	.	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	.	.	I	H	P	L	P	I	C	A	D	E	S	.	.	.	.	C	H	T	R	S	N	L	K	A	L	K	G	.	.	.	.	.	R	Y	E	M	V	N	I	K
Query Conservation																		.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Alig confidence																		.				.	.																	.	.												.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		S	R	D	Y	Y	T	T	L	N	K	E	I	S	N	T	G	L	V	D	L	I	D	V	E	L	F	M	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I	S	N	H	D	F	N	K	T	P	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	L	P	K	I	A
Template Known Secondary structure																T	S			S						G	G	G															T	T										S	S																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																						.	.	.	.	.														.
Query SS confidence																						.	.	.	.	.														.
Query Sequence		L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	.	.	.	.	.	G	F	S	L	M	L	G	C	M	L	C	T	S	.	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	A	D	L	D	G	P
Query Conservation																						.	.	.	.	.														.
Alig confidence						.																.	.	.	.	.														.
Template Conservation						.
Template Sequence		V	M	P	Q	.	N	E	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	I	T	M	S	M	S	G	M	G	V	I	S	R	L	C	G	E	I	F	G	S	A	L	T	F	G	A	A	K	S	V
Template Known Secondary structure					S	.	S																	T	T		S	S		B						T	G	G	G	T											B						B	S	S	S
Template Predicted Secondary structure						.
Template SS confidence
		174	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions