Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 26 Aligned Residues 311 % Identity 30% Template c3ik4A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from herpetosiphon aurantiacus Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																						.
Alig confidence																							.	.	.	.	.	.	.	.								.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		I	Q	A	I	S	A	E	A	I	N	L	P	L	T	E	P	A	V	A	A	N	.	.	.	.	.	.	.	.	V	L	V	K	V	Q	L	A	D	G	T	L	G	L	G	E	A	A	P	F	P	A	V	S	G	E	T	Q	T	G	T	S	A	A	I	E	R	L	Q	S	H	L	L	G	A	D	V	R	G	W	R
Template Known Secondary structure														B	S								.	.	.	.	.	.	.	.								T	T	S												T	T	T															G	G	G	T	T	T		B	G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		80	.									.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.
Query Sequence		K	I	.	.	.	.	.	.	.	.	L	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K
Query Conservation				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																				.
Template Conservation																																															.
Template Sequence		K	L	A	A	M	L	D	H	A	E	H	E	A	A	A	A	R	C	G	L	E	M	A	M	L	D	A	L	T	R	H	Y	H	M	P	L	H	V	F	F	G	G	V	S	K	.	Q	L	E	T	D	M	T	I	T	A	G	D	E	V	H	A	A	A	S	A	K	A	I	L	A	R	G	I	K	S	I	K	V	K
Template Known Secondary structure												T	T																				T	T		B					T	T		S		S	.				B							S															T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		152	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.
Predicted Secondary structure				.	.	.																																										.	.																								.	.
Query SS confidence				.	.	.																																										.	.																								.	.
Query Sequence		L	D	.	.	.	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	.	.	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	.	.	H	P	L	P	I	C	A
Query Conservation				.	.	.																																										.	.																								.	.
Alig confidence				.	.	.																																										.	.																								.	.
Template Conservation
Template Sequence		T	A	G	V	D	V	A	Y	D	L	A	R	L	R	A	I	H	Q	A	A	P	T	A	P	L	I	V	D	G	N	C	G	Y	D	V	E	R	A	L	A	F	C	A	A	C	K	A	E	S	I	P	M	V	L	F	E	Q	P	L	P	R	E	D	W	A	G	M	A	Q	V	T	A	Q	S	G	F	A	V	A	A
Template Known Secondary structure				S	S																S	S	S								T	T																	T	T										S		T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																																					.	.	.
Query SS confidence																.	.																																																					.	.	.
Query Sequence		D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	.	.	.	P	Q	V	S	F	A	D	L	D
Query Conservation																.	.																																																					.	.	.
Alig confidence																.	.													.																																								.	.	.
Template Conservation																														.
Template Sequence		D	E	S	A	R	S	A	H	D	V	L	R	I	A	R	E	G	T	A	S	V	I	N	I	K	L	M	K	.	A	G	V	A	E	G	L	K	M	I	A	I	A	Q	A	A	G	L	G	L	M	I	G	G	M	V	E	S	I	L	A	M	S	F	S	A	N	L	A	A	G	N	G	G	F	D	F	I	D	L	D
Template Known Secondary structure		S	T	T		S	S											T			S									.																	T								S	S
Template Predicted Secondary structure																														.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	P	T	W	L	A	V	D	V	E	.	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		T	P	L	F	I	A	E	H	P	F	I	G	G	F	A	Q	T	G	G	T	L	Q	L
Template Known Secondary structure		G	G	G	G	B	S			S				S					T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions