Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 39 Aligned Residues 316 % Identity 25% Template c3eezA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																.
Query SS confidence																																						.																.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	.	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L
Query Conservation																																						.																.
Alig confidence																			.	.	.	.																.																.
Template Conservation																			.	.	.	.
Template Sequence		I	T	R	I	T	V	Y	Q	V	D	L	P	L	E	H	P	Y	.	.	.	.	W	K	F	E	L	L	D	A	T	L	V	K	L	E	T	D	A	G	I	T	G	W	G	E	G	T	P	W	G	H	T	Y	V	P	A	H	G	P	G	I	R	A	G	I	E	T	M	A	P	F	V	L	G	L	D	P	R	R	L
Template Known Secondary structure														B	S	S			.	.	.	.																T	T											S		S	S	S	S	S																		T	T	S		T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.									.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		Q	K	I	.	.	.	.	.	.	.	.	L	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	V	E	R	A	M	D	I	A	L	P	G	H	L	Y	A	K	S	P	I	D	M	A	C	W	D	I	A	G	Q	A	A	G	L	P	I	A	D	L	M	G	G	G	S	R	T	P	R	P	I	A	S	S	V	G	A	K	S	V	E	E	T	R	A	V	I	D	R	Y	R	Q	R	G	Y	V	A	H	S	V
Template Known Secondary structure												S	S	S																				T	T	S	B					T	T					S				B	B			B		S																T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		151	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																	.
Query SS confidence					.	.																	.
Query Sequence		K	L	D	.	.	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	H	P	L	P	I	C	A	D	E	S
Query Conservation					.	.																	.
Alig confidence					.	.																	.																														.
Template Conservation																																																					.
Template Sequence		K	I	G	G	D	V	E	R	D	I	A	R	I	R	D	V	E	D	I	R	E	P	G	E	I	V	L	Y	D	V	N	R	G	W	T	R	Q	Q	A	L	R	V	M	R	A	T	E	D	L	H	V	.	M	F	E	Q	P	G	E	T	L	D	D	I	A	A	I	R	P	L	H	S	A	P	V	S	V	D	E	C
Template Known Secondary structure					S													T	T	S			T	T								T	T														T	G	G	G	T		.						S	S	S							T	G	G	G									T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		228	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.
Predicted Secondary structure													.	.																																																										.	.	.	.
Query SS confidence													.	.																																																										.	.	.	.
Query Sequence		C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	.	.	.	.	A	D	L	D	G	P
Query Conservation													.	.																																																										.	.	.	.
Alig confidence													.	.																																																										.	.	.	.
Template Conservation
Template Sequence		L	V	T	L	Q	D	A	A	R	V	A	R	D	G	L	A	E	V	F	G	I	K	L	N	R	V	G	G	L	T	R	A	A	R	M	R	D	I	A	L	T	H	G	I	D	M	F	V	M	A	T	G	G	S	V	L	A	D	A	E	A	L	H	L	A	A	T	I	P	D	H	A	C	H	A	V	W	A	C	Q
Template Known Secondary structure				S										T	T			S										T	S														T	T								S	S		S													T	S		G	G	G	B			B			S	G
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		302	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		T	W	L	A	V	D	V	E	.	.	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		D	M	L	T	V	D	I	A	G	G	R	G	P	R	N	I	D	G	H	L	H	L
Template Known Secondary structure		G	G	B	S			T	T	T	T		S	S			B	T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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