Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 58 Aligned Residues 303 % Identity 19% Template c3bsmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from2 chromohalobacter salexigens Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																						.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.														.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		I	R	D	A	Y	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	C	P	G	R	N	F	V	T	L	K	I	V	T	E	S	G	T	H	G	I	G	D	A	T	L	N	G	.	.	.	.	R	E	M	A	V	A	A	Y	L	D	E	H	V	V	P	A	L	I	G	R	D	A	G	R	I	E
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S										T	T	S										T	T	.	.	.	.												T						T	T	S	B	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.															.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		80	.	.	.	.														.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	W	Q	Y	L	Y	R	G	A	Y	W	R	R	G	P	V	T	M	T	A	I	A	A	V	D	M	A	L	W	D	I	K	A	K	A	A	G	M	P	L	Y	Q	L	L	G	G	K	S	R	E	R	V	M	T	Y	A	H	C	T	G	Q	T	I	E	D	C	L	G	E	V	A	R	H	V	E	L	G	Y	R
Template Known Secondary structure											T	T	S																										T	S	B						T			S		S	S										S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		147	.	.	150	.	.	.	.									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																.
Query SS confidence										.	.	.	.	.	.	.	.																.
Query Sequence		L	L	K	V	K	L	D	N	.	.	.	.	.	.	.	.	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I
Query Conservation										.	.	.	.	.	.	.	.																.
Alig confidence										.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		A	V	R	V	Q	S	G	V	P	G	S	T	E	K	Y	L	N	H	A	P	K	L	F	A	A	V	R	E	R	F	G	D	D	L	H	V	L	H	D	V	H	H	R	L	T	P	I	E	A	A	R	L	G	K	A	V	E	P	Y	H	L	F	W	L	E	D	C	V	P	A	E	N	Q	E	S	L	R	L	I	R
Template Known Secondary structure																																	S	S	S							T	T		S												T	G	G	G			S						S			S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
				218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.																						.	.																																									.													.	.
Query SS confidence		.	.																						.	.																																									.													.	.
Query Sequence		.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	.	T	S	R	A	I	S	A	A	L	P	L	V	.	.
Query Conservation		.	.																						.	.																																									.													.	.
Alig confidence		.	.																						.	.																																									.													.	.
Template Conservation
Template Sequence		E	H	T	T	T	P	L	A	I	G	E	V	F	N	S	I	H	D	C	R	E	L	I	Q	N	Q	W	I	D	Y	I	R	M	P	L	T	H	G	G	G	I	T	A	M	R	R	V	A	D	L	A	S	L	Y	H	V	R	T	G	F	H	G	P	T	D	L	S	P	V	C	L	G	A	A	I	H	F	D	T	W
Template Known Secondary structure						S						T	T			S	G	G	G	T						T	T			S						T	T	T	T	T															T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
			291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure		.																					.
Query SS confidence		.																					.
Query Sequence		.	P	Q	V	S	F	A	D	L	D	G	P	T	W	L	A	V	D	V	E	P	.	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation		.																					.
Alig confidence		.																					.
Template Conservation
Template Sequence		V	P	N	F	G	I	Q	E	H	M	P	H	T	D	E	T	D	A	V	F	P	H	D	Y	R	F	E	D	G	H	F	L	A
Template Known Secondary structure			T	T	B																S		B						T	T
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions