Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 65 Aligned Residues 303 % Identity 21% Template c2qjjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from novosphingobium2 aromaticivorans Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																						.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.															.														.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Sequence		I	T	A	A	R	V	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	C	P	G	R	N	F	V	T	L	K	I	E	T	D	Q	G	V	Y	G	I	G	D	A	T	L	N	G	.	.	.	.	R	E	L	S	V	V	A	Y	L	Q	E	H	V	A	P	C	L	I	G	M	D	P	R	R	I	E
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S										T	T	S										T	T	.	.	.	.												T						T	T	S		T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10															.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		80	.	.	.	.														.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	W	Q	Y	V	Y	R	G	A	Y	W	R	R	G	P	V	T	M	R	A	I	A	A	V	D	M	A	L	W	D	I	K	A	K	M	A	G	M	P	L	Y	Q	L	L	G	G	R	S	R	D	G	I	M	V	Y	G	H	A	N	G	S	D	I	A	E	T	V	E	A	V	G	H	Y	I	D	M	G	Y	K
Template Known Secondary structure											T	S	S																										T	S	B						T			S		S	S										S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		147	.	.	150	.	.	.																		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		L	L	K	V	K	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		A	I	R	A	Q	T	G	V	P	G	I	S	L	P	S	V	T	G	W	D	T	R	K	A	L	N	Y	V	P	K	L	F	E	E	L	R	K	T	Y	G	F	D	H	H	L	L	H	D	G	H	H	R	Y	T	P	Q	E	A	A	N	L	G	K	M	L	E	P	Y	Q	L	F	W	L	E	D	C	T	P	A	E
Template Known Secondary structure										T	T																T	T														S	S	S							T	T		S													G	G	G			S				S		S			S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		209	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.
Predicted Secondary structure											.	.																						.	.																																						.
Query SS confidence											.	.																						.	.																																						.
Query Sequence		D	D	A	A	L	E	N	F	I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	.	M	L	C	T	S	R	A	I
Query Conservation											.	.																						.	.																																						.
Alig confidence											.	.																						.	.																																						.
Template Conservation
Template Sequence		N	Q	E	A	F	R	L	V	R	Q	H	T	V	T	P	L	A	V	G	E	I	F	N	T	I	W	D	A	K	D	L	I	Q	N	Q	L	I	D	Y	I	R	A	T	V	V	G	A	G	G	L	T	H	L	R	R	I	A	D	L	A	S	L	Y	Q	V	R	T	G	C	H	G	A	T	D	L	S	P	V	T	M
Template Known Secondary structure		S	G	G	G	G									S						T	T			S	G	G	G	T						T	T			S						T	T	T	T	T															T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		284	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure														.	.	.																.
Query SS confidence														.	.	.																.
Query Sequence		S	A	A	L	P	L	V	P	Q	V	S	F	.	.	.	A	D	L	D	G	P	T	W	L	A	V	D	V	E	P	.	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation														.	.	.																.
Alig confidence														.	.	.																.
Template Conservation
Template Sequence		G	C	A	L	H	F	D	T	W	V	P	N	F	G	I	Q	E	Y	M	R	H	T	E	E	T	D	A	V	F	P	H	D	Y	W	F	E	K	G	E	L	F	V
Template Known Secondary structure												T	T	B																S		B	S					T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions