Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 61 Aligned Residues 307 % Identity 20% Template c2ox4E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																						.
Alig confidence																		.	.	.	.	.	.	.	.	.	.											.																				.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		I	T	K	I	E	I	F	H	V	H	T	R	P	Q	S	G	.	.	.	.	.	.	.	.	.	.	Q	R	P	I	L	V	K	V	S	T	D	E	G	I	Y	G	L	G	E	A	G	I	A	Y	G	V	G	G	S	A	.	.	.	A	A	G	I	L	K	D	Y	A	A	L	L	I	G	E	D	P	F	N	T	E
Template Known Secondary structure														T	T	T		.	.	.	.	.	.	.	.	.	.											T	T	S								S		S	S	S	S					.	.	.													T	T			T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.											.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		80	.																.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	.	.	.	.	.	.	.	.	.	.	I	G	T	P	D	Q	M	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	W	E	K	L	F	K	K	T	F	W	G	Q	G	G	G	T	V	I	F	S	G	I	S	A	F	D	I	A	F	W	D	I	K	G	K	A	L	N	L	P	V	Y	K	L	L	G	G	K	N	R	E	D	L	R	V	Y	A	S	Q	L	Q	F	G	W	G	K	E	R	K	S	K	G	R	K	E	E	Y	A
Template Known Secondary structure										S	S	S	G	G	G	G																									T	S	B	G	G	G	G	T	T			S	S	S	S								G	G	G		S	S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		E	E	A	L	K	A	V	A	E	G	Y	D	A	V	K	V	D	V	L	A	H	D	R	N	G	S	R	E	G	V	F	L	E	G	P	L	P	S	E	T	I	K	I	G	V	E	R	V	E	A	I	R	N	A	V	G	P	D	V	D	I	I	V	E	N	H	G	H	T	D	L	V	S	A	I	Q	F	A	K	A
Template Known Secondary structure										T	T		S						S	S	S	S		T	T	S			T	T				S	S	S																						T	T	S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																				.	.
Query SS confidence																													.	.																				.	.
Query Sequence		L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	H	P	.	.	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G
Query Conservation																													.	.																				.	.
Alig confidence																													.	.																				.	.
Template Conservation
Template Sequence		I	E	E	F	N	I	F	F	Y	E	E	I	N	T	P	L	N	P	R	L	L	K	E	A	K	K	K	I	D	I	P	L	A	S	G	E	R	I	Y	S	R	W	G	F	L	P	F	L	E	D	R	S	I	D	V	I	Q	P	D	L	G	T	C	G	G	F	T	E	F	K	K	I	A	D	M	A	H	I	F	E
Template Known Secondary structure			G	G	G			S						S		T	T	S	T								T	T			S						T	T													T	T			S						T	T	T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	A	D	L	.	.	.	.	.	.	D	G	P	T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation																																.	.	.	.	.	.
Alig confidence								.																								.	.	.	.	.	.
Template Conservation								.
Template Sequence		V	T	V	Q	A	H	.	V	A	G	T	G	V	A	E	A	A	S	L	H	A	E	I	A	I	P	N	F	C	I	H	E	H	H	Q	K	T	L	L	P	E	Y	E	E	L	C	V	H	N	Y	Q	P	V	K	G	R	Y	K	V
Template Known Secondary structure								.			S														T		S	S	B							G	G	G	G	S					T	T	B	S						B	T	T
Template Predicted Secondary structure								.
Template SS confidence
		310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions