Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 63 Aligned Residues 305 % Identity 23% Template c2o56D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of a member of the enolase superfamily from2 salmonella typhimurium Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	.	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q
Query Conservation																																						.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.											.																			.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		I	T	S	V	D	I	I	D	V	A	N	D	F	K	.	.	.	.	.	.	.	.	.	.	.	.	W	R	P	V	V	V	K	I	N	T	D	E	G	I	S	G	F	G	E	V	G	L	A	Y	G	V	G	A	S	.	.	.	A	G	I	G	M	A	K	D	L	S	A	I	I	I	G	M	D	P	M	N	N	E
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.											T	T	S								S		S	S	S	S				.	.	.														T	T	S		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.													.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		80	.	.	.	.																.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	D	Q
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	W	E	K	M	L	K	K	T	F	W	G	Q	G	G	G	G	I	F	S	A	A	M	S	G	I	D	I	A	L	W	D	I	K	G	K	A	W	G	V	P	L	Y	K	M	L	G	G	K	S	R	E	K	I	R	T	Y	A	S	Q	L	Q	F	G	W	G	D	G	S	D	K	D	M	L	T	E	P	E	Q
Template Known Secondary structure										S	S	S	G	G	G	G																									T		B					T	T			S		S									G	G	G			S	T	T		T	T					S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		Y	A	Q	A	A	L	T	A	V	S	E	G	Y	D	A	I	K	V	D	T	V	A	M	D	R	H	G	N	W	N	Q	Q	N	L	N	G	P	L	T	D	K	I	L	R	L	G	Y	D	R	M	A	A	I	R	D	A	V	G	P	D	V	D	I	I	A	E	M	H	A	F	T	D	T	T	S	A	I	Q	F	G
Template Known Secondary structure												T	T		S							S	S	B		T	T	S		B	S		S				S	S																						T	T	S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																													.	.																						.	.
Query SS confidence																													.	.																						.	.
Query Sequence		Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A
Query Conservation																													.	.																						.	.
Alig confidence																													.	.																						.	.
Template Conservation
Template Sequence		R	M	I	E	E	L	G	I	F	Y	Y	E	E	P	V	M	P	L	N	P	A	Q	M	K	Q	V	A	D	K	V	N	I	P	L	A	A	G	E	R	I	Y	W	R	W	G	Y	R	P	F	L	E	N	G	S	L	S	V	I	Q	P	D	I	C	T	C	G	G	I	T	E	V	K	K	I	C	D	M	A	H	V
Template Known Secondary structure					G	G	G								S	S		S	S	S													S						T	T													T	T			S						T	T	T	T	T														T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.
Query Sequence		Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	A	D	L	.	.	.	.	.	.	D	G	P	T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation																																		.	.	.	.	.	.
Alig confidence												.																						.	.	.	.	.	.
Template Conservation												.
Template Sequence		Y	D	K	T	V	Q	I	H	V	C	.	G	G	P	I	S	T	A	V	A	L	H	M	E	T	A	I	P	N	F	V	I	H	E	L	H	R	Y	A	L	L	E	P	N	T	Q	T	C	K	Y	N	Y	L	P	K	N	G	M	Y	E	V
Template Known Secondary structure		T	T									.	S																S	S	B							G	G	G	G	S					T	T	B	S						B	T	T
Template Predicted Secondary structure												.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions