Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 43 Aligned Residues 321 % Identity 21% Template c2hxtA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:l-fuconate dehydratase; PDBTitle: crystal structure of l-fuconate dehydratase from xanthomonas2 campestris liganded with mg++ and d-erythronohydroxamate Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.										.
Query SS confidence																												.	.	.	.										.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	.	.	.	.	A	R	V	V	V	V	E	L	E	.	E	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R
Query Conservation																												.	.	.	.										.
Alig confidence																												.	.	.	.										.
Template Conservation
Template Sequence		I	I	A	L	E	T	H	D	V	R	F	P	T	S	R	E	L	D	G	S	D	A	M	N	P	D	P	D	Y	S	A	A	Y	V	V	L	R	T	D	G	A	E	D	L	A	G	Y	G	L	V	F	T	I	G	R	G	N	D	V	Q	T	A	A	V	A	A	L	A	E	H	V	V	G	L	S	V	D	K	V	I
Template Known Secondary structure														G	G	G	T	T	T	T			S	S		S	S													S	S		T	T											S	T	T										T	T					T	T		B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		76	.	.	.	80	.	.	.																		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	L	Q	K	I	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	L	G	A	F	A	R	R	L	T	N	D	S	Q	L	R	W	L	G	P	E	K	G	V	M	H	M	A	I	G	A	V	I	N	A	A	W	D	L	A	A	R	A	A	N	K	P	L	W	R	F	I	A	E	L	T	P	E	Q	L	V	D	T	I	D	F	R	Y	L	S	D	A	L	T	R	D	E	A	L
Template Known Secondary structure													T							T		S	S	S																						T	T	S	B							T	S												T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																																			128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.															.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.															.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	D	N	H	.	.	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.															.
Template Conservation
Template Sequence		A	I	L	R	D	A	Q	P	Q	R	A	A	R	T	A	T	L	I	E	Q	G	Y	P	A	Y	T	T	S	P	G	W	L	G	Y	S	D	E	K	L	V	R	L	A	K	E	A	V	A	D	G	F	R	T	I	K	L	K	V	G	A	N	V	Q	D	D	I	R	R	C	R	L	A	R	A	A	I	G	P	D	I
Template Known Secondary structure								G	G	G																							T	T	S															T	T		S								S																		S	S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.																						.	.
Query SS confidence																																																.	.	.																						.	.
Query Sequence		T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	.	.	.	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I
Query Conservation																																																.	.	.																						.	.
Alig confidence																																																.	.	.																						.	.
Template Conservation
Template Sequence		A	M	A	V	D	A	N	Q	R	W	D	V	G	P	A	I	D	W	M	R	Q	L	A	E	F	D	I	A	W	I	E	E	P	T	S	P	D	D	V	L	G	H	A	A	I	R	Q	G	I	T	P	V	P	V	S	T	G	E	H	T	Q	N	R	V	V	F	K	Q	L	L	Q	A	G	A	V	D	L	I	Q	I
Template Known Secondary structure								T	T													T	T	G	G	G			S						S		T	T													T	T	S						T	T			S											T			S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	.	.	.	.	.	.	P	Q	V	S	F	A	D	L	D	G	P	T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	A	R	V	G	G	V	N	E	N	L	A	I	L	L	L	A	A	K	F	G	V	R	V	F	P	H	A	G	G	V	G	L	C	E	L	V	Q	H	L	A	M	A	D	F	V	A	I	T	G	K	M	E	D	R	A	I	E	F	V	D	H	L	H	Q	H	F	L	D	P	V	R	I	Q	H	G	R	Y	L
Template Known Secondary structure			T	T	T	S	S															T	T									S	T	T																T	T				T	T								S	S	G	G	G	B	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		321
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		404

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions