Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 120 Aligned Residues 289 % Identity 23% Template c2fymA_ PDB info PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of e. coli enolase complexed with the2 minimal binding segment of rnase e. Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.																		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	.	E	E	G	I	K	G	T	G	E	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A	Q	I
Query Conservation																																					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.									.	.	.	.							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.									.	.	.	.
Template Sequence		I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	.	.	.	.	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V
Template Known Secondary structure											.	.	.	.	.	.	.	.			T	T	S				.	.	.	.								T	T	S												S	S		S	S	S									T	T	S	G	G	G	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.									.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.															.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q	K	I	L	P	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M
Template Known Secondary structure			T							T	T	S	B	T	T															S	T	T		T	T	T																				T	T	S										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
																							128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K
Template Known Secondary structure							G	G	G	S	S	S	S			S	S							T	T		S	S																						T	T					B		T	T	S		B					S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
								169		170	.	.	.	.	.	.																		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.
Predicted Secondary structure		.	.	.	.	.	.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																										.	.
Query SS confidence		.	.	.	.	.	.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																										.	.
Query Sequence		.	.	.	.	.	.	P	.	D	A	T	L	I	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	.	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	H	.	.	P	L	P
Query Conservation		.	.	.	.	.	.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																										.	.
Alig confidence		.	.	.	.	.	.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																										.	.
Template Conservation
Template Sequence		A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K
Template Known Secondary structure			T	T			B	T	T	T	B								G	G	G	G			T	T					G	G	G	T	T																			S							S		S		T	T													T	T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		222	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure					.	.	.															.	.																																								.
Query SS confidence					.	.	.															.	.																																								.
Query Sequence		I	C	A	.	.	.	D	E	S	C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	.	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F
Query Conservation					.	.	.															.	.																																								.
Alig confidence					.	.	.															.	.																																								.
Template Conservation
Template Sequence		I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q
Template Known Secondary structure		S					S	T	T	T	T	T											T	T			S						G	G	G	T		S														T	T									S	S			S											T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		296	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L	D	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	T	G	S	M
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions