Job Description P51981 Confidence 100.00% Date Thu Jan 5 12:04:52 GMT 2012 Rank 15 Aligned Residues 320 % Identity 23% Template c1sjaA_ PDB info PDB header:lyase, isomerase Chain: A: PDB Molecule:n-acylamino acid racemase; PDBTitle: x-ray structure of o-succinylbenzoate synthase complexed2 with n-acetylmethionine Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.																											.	.
Query SS confidence																																																			.	.	.																											.	.
Query Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	E	G	I	K	G	T	G	E	C	T	P	Y	P	.	.	.	R	Y	G	E	S	D	A	S	V	M	A	Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	.	.
Query Conservation																																																			.	.	.																											.	.
Alig confidence																																																			.	.	.																											.	.
Template Conservation
Template Sequence		L	S	G	V	E	L	R	R	V	Q	M	P	L	V	A	P	F	R	T	S	F	G	T	Q	S	V	R	E	L	L	L	L	R	A	V	T	P	A	G	E	G	W	G	E	C	V	T	M	A	G	P	L	Y	S	S	E	Y	N	D	G	A	E	H	V	L	R	H	Y	L	I	P	A	L	L	A	A	E	D	I	T
Template Known Secondary structure																					T	T																S	S										B	S	S	S	S	S	S	S		B											T							T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
							76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	E	E	L	Q	K	I	L	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I	T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		A	A	K	V	T	P	L	L	A	K	F	K	G	H	R	M	A	K	G	A	L	E	M	A	V	L	D	A	E	L	R	A	H	E	R	S	F	A	A	E	L	G	S	V	R	D	S	V	P	C	G	V	S	V	G	I	M	D	T	I	P	Q	L	L	D	V	V	G	G	Y	L	D	E	G	Y	V	R	I	K	L
Template Known Secondary structure										T	T	S																							T		B						T				S				B								S	S															T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																																			.	.
Query SS confidence																					.																																																			.	.
Query Sequence		K	L	D	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	.	D	A	T	L	I	V	D	A	N	E	S	W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	H	P	.	.	L	P	I	C	A	D	E	S
Query Conservation																					.																																																			.	.
Alig confidence																					.																							.																												.	.
Template Conservation																																												.
Template Sequence		K	I	E	P	G	W	D	V	E	P	V	R	A	V	R	E	R	F	G	D	D	V	L	L	Q	V	D	A	N	T	A	Y	T	L	G	D	A	P	Q	L	A	R	.	L	D	P	F	G	L	L	L	I	E	Q	P	L	E	E	E	D	V	L	G	H	A	E	L	A	R	R	I	Q	T	P	I	C	L	D	E	S
Template Known Secondary structure				B	T	T	B	S													S	S	S							T	T		B		G	G	G						T	.	T	G	G	G			S						B		T	T									T	T	T		S	S					S	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		228	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.
Predicted Secondary structure													.	.																																																										.	.	.							.
Query SS confidence													.	.																																																										.	.	.							.
Query Sequence		C	H	T	R	S	N	L	K	A	L	K	.	.	G	R	Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	.	.	.	A	D	L	D	G	P	.
Query Conservation													.	.																																																										.	.	.							.
Alig confidence													.	.																																																										.	.	.							.
Template Conservation
Template Sequence		I	V	S	A	R	A	A	A	D	A	I	K	L	G	A	V	Q	I	V	N	I	K	P	G	R	V	G	G	Y	L	E	A	R	R	V	H	D	V	C	A	A	H	G	I	P	V	W	C	G	G	M	I	E	T	G	L	G	R	A	A	N	V	A	L	A	S	L	P	N	F	T	L	P	G	D	T	S	A	S	D
Template Known Secondary structure				S											T			S						T	T	T	T	T	S														T	T									S														T	S	T	T	B		S		B	S				G	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	Y	K	T	D	I	T	E	P	F	V	L	S	G	G	H	L	P	V
Template Known Secondary structure		G	T		S	S		S	S	S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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