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Job DescriptionP51981
Confidence100.00%DateThu Jan 5 12:04:52 GMT 2012
Rank74Aligned Residues311
% Identity15%Templatec1ec8B_
PDB info PDB header:lyaseChain: B: PDB Molecule:glucarate dehydratase; PDBTitle: e. coli glucarate dehydratase bound to product 2,3-2 dihydroxy-5-oxo-hexanedioate
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEE. EGIKGTGECTPYPRYGESDASVMAQIMSVVPQLEKGLTREELQ
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Template Sequence  VTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKI. . . . . . . . RKTLEDAIPLVVGKTLGEYK
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BGGG
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Query Sequence  KILPAGA. . . . . . . . . . . . . . . . . . . . . . . ARNALDCALWDLAARRQQQSLADLIG. ITLPETVITAQTV. . . . . . . . . .
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Template Sequence  NVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATP
Template Known Secondary structure  TGGGGTT
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STT
BGGGGSTTS


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GGGS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   126...130.........140... ......150.... .....160.........170.........180..
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Query Sequence  . . . . . . . . . . . . . . . . . . . VIGTPDQMANSASTLWQA. GAKLLKVKLDN. . . HLISERMVAIRTAVPDATLIVDANESWR
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Template Sequence  LPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAWS
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TT
SSTTS
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S

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TTS

TT
B
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
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Query Sequence  AEGLAARCQLLADLGVAMLEQPLPAQD. . . . DAALENFI. . HPLPICADESCHTRSNLKALK. . GRYEMVNIKLDKTGGL
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Template Sequence  LNEAIKIGKYLKG. SLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADP. HFWTM
Template Known Secondary structure  TTT.T
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   242.......250.... .....260.........270.........280.........290.........300.........310.... .....
 
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Query Sequence  TEALALATEARAQGFSLMLGCMLCTSRAISAALPLVPQVSFADL. . . . . . DGPTWLAVDVEPALQFTTGELHL
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Template Sequence  QGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
Template Known Secondary structure  T


B



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   320.........330.........340.........350.........360.........370.........380.........390..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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