 |
Job Description | P0A6M4 | Confidence | 9.25% | Date | Thu Jan 5 11:03:33 GMT 2012 |
Rank | 40 | Aligned Residues | 94 |
% Identity | 15% | Template | d1rq2a2 |
SCOP info | Bacillus chorismate mutase-like
| Tubulin C-terminal domain-like
| Tubulin, C-terminal domain
|
Resolution | 1.86 |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | A | G | L | L | V | L | L | G | V | E | K | D | D | D | E | Q | K | A | N | R | L | C | E | R | V | L | G | Y | R | I | F | S | D | A | E | G | K | M | N | L | N | V | Q | Q | A | G | G | S | V | L | V | V | S | Q | F | T | L | A | A | D | T | E | R | G | M | R | P | S | F | S | K | G | A | S | P | D | R | A |
Query Conservation |   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |
|
|   |
|
|   |   |   |
|
|   |
|   |   |
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|
|   |
|   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|   |
|
|   |
|   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
M | S | G | A | G | T | A | L | M | G | I | G | S | A | R | G | E | G | R | S | L | K | A | A | E | I | A | I | N | S | P | L | L | E | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | E | G | A | Q | G | V | L | M | S | I | A | G | G | S | D | L | G |
Template Known Secondary structure |   |
 | T | T |
|
|
|  |  |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | G |
| S |  |  |  |  |  |  |  |  |
| T | T |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
  |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | L | Y | D | Y | F | V | E | R | C | R | Q | Q | E | M | N | T | Q | T | G | R | F | A | A | D | M | Q | V | S | L | V | N | D | G | P | V | T | F | W |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|   |
|   |
|   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|
Template Sequence |   |
L | F | E | I | N | E | A | A | S | L | V | Q | D | A | A | H | P | D | A | N | I | I | F | G | T | V | I | D | D | S | L | G | D | E | V | R | V | T | V | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  |  |  |
| G | G | G | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|