Job Description P0A6M4 Confidence 8.07% Date Thu Jan 5 11:03:33 GMT 2012 Rank 47 Aligned Residues 50 % Identity 14% Template c3h16A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:tir protein; PDBTitle: crystal structure of a bacteria tir domain, pdtir from2 paracoccus denitrificans Resolution 2.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60										.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.												.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.												.	.	.	.	.	.	.	.	.
Query Sequence		V	L	L	G	V	E	K	D	D	D	E	Q	K	A	N	R	L	C	E	R	V	.	.	L	G	Y	R	I	F	S	D	A	E	G	.	.	.	.	.	.	.	.	.	K	M	N	L	N	V	Q	Q	A	G	G	S	V	L	V	V	S	Q
Query Conservation																							.	.												.	.	.	.	.	.	.	.	.
Alig confidence																							.	.												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	I	S	H	A	W	E	D	K	A	D	F	V	E	A	L	A	H	T	L	R	A	A	G	A	E	V	W	Y	D	D	F	S	L	R	P	G	D	S	L	R	R	S	I	D	K	G	L	G	S	S	R	F	G	I	V	V	L	S	T
Template Known Secondary structure								G	G	G	T	T	T	T												T						G	G	G				T	T												T	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions