 |
Job Description | P76462 | Confidence | 26.64% | Date | Thu Jan 5 12:23:07 GMT 2012 |
Rank | 56 | Aligned Residues | 69 |
% Identity | 13% | Template | d2cuha1 |
SCOP info | Immunoglobulin-like beta-sandwich
| Fibronectin type III
| Fibronectin type III
|
Resolution | UNK |
|
 |
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | L | S | W | D | T | D | N | T | D | L | D | L | H | V | V | T | P | D | G | E | H | A | W | Y | G | N | T | V | L | K | N | S | G | A | L | D | M | D | V | T | T | G | Y | G | P | E | I | F | A | M | P | A | P | I | H | G | . |
R | Y | Q | V | Y | I | N | Y | Y | G | G | R | S | E | T | E | L | T | T | A | Q |
Query Conservation |   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |
| . |   |
|   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
A | V | L | H | W | K | P | P | Q | N | P | V | D | T | Y | . |
. |
. |
. |
. |
. |
. |
D | I | Q | V | T | A | P | G | A | P | P | . |
. |
. |
. |
. |
L | Q | A | E | T | P | G | S | A | V | D | Y | P | L | H | D | L | V | L | H | T | N | Y | T | A | T | V | R | G | L | R | G | P | N | L | T | S | P | A | S | I | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| S | S |
|
| S |  |  | . | . | . | . | . | . | . |  |  |  |  |  |
| S | S | S |
|
| . | . | . | . | . |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  | T | T |  |  |
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
224 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
L | T |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
F | T |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
92 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|