Return to main results Retrieve Phyre Job Id

Job DescriptionP76462
Confidence75.89%DateThu Jan 5 12:23:07 GMT 2012
Rank14Aligned Residues72
% Identity13%Templated1nqjb_
SCOP infoCUB-like Collagen-binding domain Collagen-binding domain
Resolution1.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.........200.........210.......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  TIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSET
Query Conservation       







 
 






  
 
 



       

 

 
 
 




  

     
 
 
 
 



    
Alig confidence 










.





















.............




























....
Template Conservation       
 
 
 .          
           .............              
  




 
    
....
Template Sequence  KEEGEVNIELD. KKDEFGVTWTLHPESNINDRIT. . . . . . . . . . . . . YGQVDGNKVSNKVKLRPGKYYLLVYKYSG. . . .
Template Known Secondary structure  SS
.SS

S
SS



.............
TT
SS....
Template Predicted Secondary structure 



.










.............












....
Template SS confidence 















































































   937..940....... ..950.........960......... 970.........980.........990........
 
   218.220.........230
Predicted Secondary structure 

Query SS confidence 












Query Sequence  ELTTAQLTLITDE
Query Conservation    
   


    
Alig confidence  ...









Template Conservation  ...
  
 
 
  
Template Sequence  . . . SGNYELRVNK
Template Known Secondary structure  ...

Template Predicted Secondary structure  ...


Template SS confidence 












   9991000........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions