Job Description P76462 Confidence 42.31% Date Thu Jan 5 12:23:07 GMT 2012 Rank 37 Aligned Residues 163 % Identity 9% Template c2qbwA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:pdz-fibronectin fusion protein; PDBTitle: the crystal structure of pdz-fibronectin fusion protein Resolution 1.80 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	S	V	N	M	A	D	D	Q	N	I	S	A	Q	I	R	G	K	I	K	N	Y	A	A	A	G	K	V	Q	Q	G	R	L	V	V	N	G	A	S	M	P	Q	R	I	E	S	D	G	S	F	A	R	P	Y	I	F	T	E	G	S	N	S	V	Q	V	I	S	P	D	G	Q	S	R	Q	K	M	Q	F	Y
Query Conservation
Alig confidence																										.	.																															.	.
Template Conservation																										.	.																															.	.
Template Sequence		N	P	F	R	P	D	D	D	G	I	F	V	T	R	V	Q	P	E	G	P	A	S	K	L	.	.	L	Q	P	G	D	K	I	I	Q	A	N	G	Y	S	F	I	N	I	E	H	G	Q	A	V	S	L	L	K	T	F	.	.	Q	N	T	V	E	L	I	I	V	R	E	V	G	N	G	A	K	Q	E	I	R	V
Template Known Secondary structure			S	S		T	T			S								T	T	S	T	T	T	T	T	.	.			T	T							T	T				T	T														.	.		S											S	S	S
Template Predicted Secondary structure																										.	.																															.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.									.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		S	T	P	G	T	G	T	I	R	A	R	L	R	.	.	.	.	.	.	.	.	L	V	L	S	W	D	T	D	N	T	D	L	D	L	H	V	V	T	P	D	G	E	H	A	W	Y	G	N	T	V	L	K	N	S	G	A	L	D	M	D	V	T	T	G	Y	G	P	E	I	F	A	M	P	A	P	I	H	G	R
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																		.	.	.	.	.	.																					.	.	.	.
Template Conservation																																								.	.	.	.	.	.																					.	.	.	.
Template Sequence		R	V	E	K	D	S	S	V	P	T	N	L	E	V	V	A	A	T	P	T	S	L	L	I	S	W	D	A	S	Y	Y	G	V	S	Y	Y	R	I	.	.	.	.	.	.	T	Y	G	E	T	G	G	N	S	P	V	Q	E	F	T	V	P	Y	S	S	.	.	.	.	S	T	A	T	I	S	G	L	K	P	G	V
Template Known Secondary structure									S	S										T	T											S	S		S					.	.	.	.	.	.					T	T			S									T	T		.	.	.	.	S						S			T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.
			204	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.												.
Query SS confidence		.												.
Query Sequence		.	Y	Q	V	Y	I	N	Y	Y	G	G	R	.	S	E	T	E	L	T	T	A	Q	L	T	L	I	T
Query Conservation		.												.
Alig confidence		.												.
Template Conservation
Template Sequence		D	Y	T	I	T	V	Y	A	Y	S	D	Y	Y	G	S	H	H	Y	S	P	I	S	I	N	Y	R	T
Template Known Secondary structure											S	S	T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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