 |
Job Description | P75856 | Confidence | 48.17% | Date | Thu Jan 5 12:15:05 GMT 2012 |
Rank | 47 | Aligned Residues | 103 |
% Identity | 13% | Template | c3rb7E_ |
PDB info |
PDB header:metal binding protein | Chain: E: PDB Molecule:na/ca exchange protein; |
PDBTitle: crystal structure of cbd12 from calx1.2
|
Resolution | 2.90 Å |
|
 |
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | L | A | A | T | R | L | V | Y | S | E | G | E | E | Q | I | S | L | G | V | R | N | T | S | P | . |
D | V | P | Y | L | I | Q | S | W | V | M | T | P | D | N | K | K | S | A | D | F | I | I | T | P | P | L | F | V | L | N | P | A | N | . |
E | N | L | L | R | I | M | Y | I | G | A | P | L | A | K | D | R | E |
Query Conservation |   |
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   | . |   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|   |   | . |   |
|   |
|
|
|   |   |   |   |   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |
|
Template Sequence |   |
M | Y | F | E | P | G | H | Y | T | V | M | E | N | C | G | E | F | E | V | R | V | V | R | R | G | D | I | S | T | Y | A | S | V | E | Y | E | T | Q | D | G | T | A | S | A | G | T | D | F | V | G | R | K | G | L | L | S | F | P | P | G | V | D | E | Q | R | F | R | I | E | V | I | D | D | D | V | F | E | E | D | E |
Template Known Secondary structure |   |
 |  |  | S | S |
| B |
|
|  |  | T | T | S |  |  |  |  |  |  |  |  |  |  | S |
| S | S | S |
|
|  |  |  |  |  |  |  |
| S | S | S |
| T | T | T | T | S |
|
|
|  |  |  |  |  |
|
| S | S |
|
|
|  |  |  |  |  |  |  |
|
|
| S | S |
|
|
|
|  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
444 | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | F | F | T | S | V | R | A | V | P | S | T | T | K | R | K | E | G | N | T | L | K | I | A | T |
Query Conservation |   |
|   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
C | . |
F | Y | I | R | L | F | N | P | S | E | G | V | K | L | A | V | P | M | I | A | T | V | M | I |
Template Known Secondary structure |   |
 | . |  |  |  |  |  |  |
|
|
| T | T |
|
| B |
| S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
524 | |
. | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|