Job Description P75856 Confidence 4.94% Date Thu Jan 5 12:15:05 GMT 2012 Rank 92 Aligned Residues 143 % Identity 10% Template c3fcsA_ PDB info PDB header:cell adhesion/blood clotting Chain: A: PDB Molecule:integrin, alpha 2b; PDBTitle: structure of complete ectodomain of integrin aiibb3 Resolution 2.55 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	L	A	A	T	R	L	V	Y	S	E	G	E	E	.	Q	I	S	L	G	V	R	N	T	S	P	D	V	P	Y	L	I	Q	S	W	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	D	N	K	K	S	A	D	F	I	I	T	P	P	L	F	V
Query Conservation																	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.														.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																															.																																																.	.	.
Template Sequence		A	S	V	T	G	S	P	L	L	V	G	A	D	N	V	L	E	L	Q	M	D	A	A	N	E	G	E	G	A	.	Y	E	A	E	L	A	V	H	L	P	Q	G	A	H	Y	M	R	A	L	S	N	V	E	F	E	R	L	I	C	N	Q	K	K	E	N	E	T	R	V	V	L	C	E	L	G	N	P	.	.	.
Template Known Secondary structure						S		S			T	T	S														S	S		B	.	T	T									T	T											.			B								S	S	S	S									T	T	.	.	.
Template Predicted Secondary structure																															.																																																.	.	.
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.		.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		L	N	P	A	N	E	N	L	L	R	I	M	Y	I	G	A	P	L	A	K	D	R	E	T	L	F	F	T	S	V	R	A	V	P	S	T	T	K	R	K	E	G	N	T	L	K	I	A	T	Q	S	.	.	.	.	.	.	V	I	K	L	F	W	R	P	K	G	L	A	Y	P	L	G	E	A	P	A	K	L	R
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																							.																														.	.	.	.	.	.															.
Template Conservation																							.																																																		.
Template Sequence		M	K	K	N	A	Q	I	G	I	A	M	L	V	S	V	G	N	L	E	E	A	.	G	E	S	V	S	F	Q	L	Q	I	R	S	K	N	S	Q	N	P	N	S	K	I	V	L	L	D	V	P	V	R	A	E	A	Q	V	E	L	R	G	N	S	F	P	A	S	L	V	V	A	.	A	S	W	G	P	K	V	E
Template Known Secondary structure		B		T	T															T	T		.		S													S	S	S		S																								S	S						.
Template Predicted Secondary structure																							.																																																		.
Template SS confidence
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.		.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.		.	.	.	.	.	.	.	770
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	S	S	A	D	M	V	T	V	S	N	P	T	P	Y	F	I	T	L	T	D	L	K	I
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		H	T	.	.	.	.	.	Y	E	L	H	N	N	G	P	G	T	V	N	G	L	H	L	S	I
Template Known Secondary structure				.	.	.	.	.							S	S	S
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		782	.						.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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