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Job DescriptionP75856
Confidence5.05%DateThu Jan 5 12:15:05 GMT 2012
Rank91Aligned Residues57
% Identity23%Templatec3ecqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase; PDBTitle: endo-alpha-n-acetylgalactosaminidase from streptococcus pneumoniae:2 semet structure
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   167..170.........180.. .......190... ..... .200.......
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Query Sequence  MVTVSNPTPYFITLTD. . . . . . . . . . . . . . LKIGGKVVKNQ. . MISPF. . . . . . . . . . . . . . . . . . . . . . . DKYQFSLPK
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Template Sequence  RVELVDADNNKVVVTRKSNDVNSPQYRERTVTLNGRVIQDGSAYLTPWNWDANGKKLSTDKEKXYYFNTQAGATTWTLPS
Template Known Secondary structure 
TT

S
S
TTSGGGG
TTTT
B
TTS
B

GGG
SS
S

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   920.........930.........940.........950.........960.........970.........980.........990.........
 
   208.210.........220...
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Query Sequence  GAKNSSVTYRTINDYG
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Template Sequence  DWAKSKVYLYKLTDQG
Template Known Secondary structure  TS

TT
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   1000.........1010.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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