Job Description P75856 Confidence 100.00% Date Thu Jan 5 12:15:05 GMT 2012 Rank 2 Aligned Residues 194 % Identity 29% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	G	G	I	G	L	A	A	T	R	L	V	Y	S	E	G	E	E	Q	I	S	L	G	V	R	N	T	S	P	D	V	P	Y	L	I	Q	S	W	V	M	T	P	D	N	K	K	S	A	D	F	I	I	T	P	P	L	F	V	L	N	P	A	N	E	N	L	L	R	I	M	Y	I	G	A	P	L	A	K
Query Conservation
Alig confidence																																.																		.	.
Template Conservation																																.																		.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	.	D	Y	P	V	L	I	Q	S	R	I	Y	D	E	N	K	E	K	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A	Q	A	G	G	V	F	P	R
Template Known Secondary structure										S	S	S						T	T		S										S	.	S	S											T	T	S			.	.						S	S						T	T											S					S
Template Predicted Secondary structure																																.																		.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	T	L	F	F	T	S	V	R	A	V	P	S	T	T	K	R	K	E	G	N	T	L	K	I	A	T	Q	S	V	I	K	L	F	W	R	P	K	G	L	A	Y	P	L	G	E	A	P	A	K	L	R	C	T	S	S	A	D	M	V	T	V	S	N	P	T	P	Y	F	I	T	L	T	D	L	K	I	G
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	V	G	.	.	.	.	V	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	V	D	G	G	K	L	I	A	E	N	P	S	P	F	Y	M	N	I	G	E	L	T	F	G
Template Known Secondary structure		S	S																	.	.	.	.																		T	T	S		S		G	G	G	T	G	G	G							T	T								S	S	S										T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	V	V	K	N	Q	M	I	S	P	F	D	K	Y	Q	F	S	L	P	K	G	A	K	N	S	S	V	T	Y	R	T	I	N	D	Y	G	A	E	T	P	Q	L	N	C	K
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		G	K	S	I	P	S	H	Y	I	P	P	K	S	T	W	A	F	D	L	A	R	.	.	.	.	.	N	V	S	W	R	I	I	N	D	Q	G	G	L	D	R	L	Y	S	K	N
Template Known Secondary structure		T										T	T										.	.	.	.	.							B		T	T	S		B
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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