Job Description P75856 Confidence 4.53% Date Thu Jan 5 12:15:05 GMT 2012 Rank 99 Aligned Residues 74 % Identity 15% Template c1kriA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:vp4; PDBTitle: nmr solution structures of the rhesus rotavirus vp4 sialic2 acid binding domain without ligand Resolution UNK

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	P	K	G	L	A	Y	P	L	G	E	A	P	A	K	L	R	C	T	S	S	A	D	M	V	T	V	S	N	P	T	P	Y	F	I	T	L	T	D	L	K	I	G	G	K	V	V	K	N	Q	M	I	S	P	F	D	K	Y	Q	F	S	L	P	K	G	A	K	N	S	S	V	T	Y	R	T	I	N
Query Conservation
Alig confidence														.																																																						.	.	.
Template Conservation														.																																																						.	.	.
Template Sequence		Y	Q	P	T	T	F	N	P	P	V	D	Y	.	W	M	L	L	A	P	T	A	A	G	V	V	V	E	G	T	N	N	T	D	R	W	L	A	T	I	L	V	E	P	N	V	T	S	E	T	R	S	Y	T	L	F	G	T	Q	E	Q	I	T	I	A	N	A	.	.	.	S	Q	T	Q	W	K	F	I	D
Template Known Secondary structure		B									S	S		.							S	S	S									S	S	S										S	S											T	T											.	.	.		S	S
Template Predicted Secondary structure														.																																																						.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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