Job Description P75856 Confidence 42.60% Date Thu Jan 5 12:15:05 GMT 2012 Rank 49 Aligned Residues 91 % Identity 16% Template c1e42A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:ap-2 complex subunit beta; PDBTitle: beta2-adaptin appendage domain, from clathrin adaptor ap2 Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.												.
Query SS confidence																																											.	.												.
Query Sequence		G	I	G	L	A	A	T	R	L	V	Y	S	E	G	E	E	Q	I	S	L	G	V	R	N	T	S	P	D	V	P	Y	L	I	Q	S	W	V	M	T	P	D	.	.	N	K	K	S	A	D	F	I	I	T	P	.	P	L	F	V	L	N	P	A	N	E	N	L	L	R	I	M	Y	I	G	A	P	L	A	K	D
Query Conservation																																											.	.												.
Alig confidence									.																			.															.	.												.		.	.	.																	.	.	.	.	.
Template Conservation									.																			.																														.	.	.																	.	.	.	.	.
Template Sequence		G	L	E	I	S	G	T	.	F	T	H	R	Q	G	H	I	Y	M	E	M	N	F	T	N	K	A	.	L	Q	H	M	T	D	F	A	I	Q	F	N	K	N	S	F	G	V	I	P	S	T	P	L	A	I	H	T	P	.	.	.	L	M	P	N	Q	S	I	D	V	S	L	P	L	N	T	L	.	.	.	.	.
Template Known Secondary structure		T							.					T	T												S	.	S	S		B										B	T	T					S	S						S		.	.	.	B		T	T											S		.	.	.	.	.
Template Predicted Secondary structure									.																			.																														.	.	.																	.	.	.	.	.
Template SS confidence
		722	.	.	.	.	.	.		.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.		.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.				.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	T	L	F	F	T	S	V	R	A	V	P	S	T	T	K	R	K	E	G	N	T	L	K	I	A	T	Q	S	V	I	K	L	F	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	M	K	M	E	P	L	N	N	L	Q	V	A	V	K	N	N	I	D	V	F	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S		B				S	S	T	T									S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions