Return to main results Retrieve Phyre Job Id

Job DescriptionP16694
Confidence99.04%DateThu Jan 5 11:35:44 GMT 2012
Rank70Aligned Residues175
% Identity15%Templated1kk1a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.........90.........100.........110.........120.........130.........140......
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Query Sequence  RLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKH
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Template Sequence  QAEVNIGMVGHVDHGKTTLTKALTGVWTDSEELRRGITIKIGFADAEIRRC. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
STTSST




GGGGS
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   8.10.........20.........30.........40.........50........
 
   147..150.........160.........170.........180.........190.........200.........210.........220......
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Query Sequence  LTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PNCGRYSTSPVCPYCGHET
Template Known Secondary structure  .............................................................TTT

SSSB
TTT

B
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   61........70.........
 
   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  SYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNS
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Template Sequence  EFVRRVSFIDAPG. . . . . HEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIEL. . VDK
Template Known Secondary structure 
SS.....
GGG
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GGG..S
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   80.........90.. .......100.........110.........120.........130.........140......... 150..
 
   307..310.........320.........330........
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Query Sequence  DDADQVRALISGTLMKGCITPQQIFPVSSMWG
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Template Sequence  EKALENYRQIKEFIEGTVAENAPIIPISALHG
Template Known Secondary structure  TTSTTTT


BTTTT
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   153......160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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