Return to main results Retrieve Phyre Job Id

Job DescriptionP16694
Confidence99.27%DateThu Jan 5 11:35:44 GMT 2012
Rank46Aligned Residues117
% Identity31%Templatec3ibyA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of cytosolic domain of l. pneumophila feob
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  VLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDV
Query Conservation   


 
  












   

      
     
                                         
Alig confidence 














































.................................
Template Conservation   
 


  
 






 
 
    
      
              .................................
Template Sequence  HALLIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEFLLGEHL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  STTSSTTS
TTSSSTT.................................
Template Predicted Secondary structure 

















.................................
Template SS confidence 















































































   3......10.........20.........30.........40.........
 
   151........160.........170.........180.........190.........200.........210.........220.........230
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPG
Query Conservation                                                                        
         
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   231........240.........250...... ...260.........270.........280.........290.........300......
Predicted Secondary structure 










..




















Query SS confidence 

























. .

















































Query Sequence  QLTLLDTPGPNEAGQPHLQKMLNQQL. . ARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNS
Query Conservation   
 


 

                 ..     
  
                             
 

 
      
Alig confidence  .



















.



..














..













..
















Template Conservation  .  





            .         
      
    ..              ..     
 

 
      
Template Sequence  . IEITDLPGVYSLVSQDEQIA. AQSVIDLEYDCIINVIDACHL. . ERHLYLTSQLFELG. . KPVVVALNMMDIAEHRG
Template Known Secondary structure  .



SS


.S

SGGG..TTS
..S

TT
Template Predicted Secondary structure  .








.









..

..





Template SS confidence 













































































   50.........60......... 70.........80.........90 .........100.... .....110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions