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Job DescriptionP16694
Confidence94.90%DateThu Jan 5 11:35:44 GMT 2012
Rank385Aligned Residues183
% Identity14%Templatec3ea0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atpase, para family; PDBTitle: crystal structure of para family atpase from chlorobium tepidum tls
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71..... ...80.........90 .........100.........110.........120.........130.........140..
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Query Sequence  VLAIVG. TMKAGKSTTINAIV. . . . . . . GTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDC
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Template Sequence  VFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLPFGDLDXYLSGNTHSQ. . . . . . DLADISNASDRLDKSLLDT
Template Known Secondary structure  SSTTSSTTSTT



TTT

GGGGT
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GGGG

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   3......10.........20.........30.........40.........50....... ..60.........70......
 
   143......150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  DIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHL
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Template Sequence  XVQHISPSLDLIPSPATFEKIVNIEPERVSDLIHIAASFYD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  STT


SST

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   77..80.........90.........100.........110.......
 
   223......230.........240.........250.........260.........270.........280..... ....290.........300.
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Query Sequence  AGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILA. VGQSVPLYVLVNKFDQ
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Template Sequence  . . . . . . . . . YIIVDFGA. . . . . . . SIDHVGVWVLEHLDELCIVTTPSLQSLRRAGQLLKLCKEFEKPISRIEIILNRADT
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TTGGG
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   118.120..... ....130.........140.........150.........160.........170.........180.
 
   302.......310....
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Query Sequence  QDRNSDDADQVRA
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Template Sequence  SRITSDEIEKVIG
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   183......190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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