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Job DescriptionP16694
Confidence98.34%DateThu Jan 5 11:35:44 GMT 2012
Rank129Aligned Residues139
% Identity21%Templatec3a1wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:iron(ii) transport protein b; PDBTitle: crystal structue of the g domain of t. maritima feob iron2 iransporter
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  MVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTD
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Template Sequence  VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   17..20.........30.........40.........50.........60....
 
   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  VLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYP
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   230.........240..... ....250.........260.........270.........280.........290.........300........
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Query Sequence  GQLTLLDTPGPNEAGQ. PHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNSDD
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Template Sequence  . . INLIDLPGTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQSLYLLLEILEME. . KKVILAMTAIDEAKKIDRY
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   65....70.........80.........90.........100.........110.........120. ........130.........140
 
   309310.........320.........330......
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Query Sequence  ADQVRALISGTLMKGCITPQQIFPVSSM
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Template Sequence  ELQKHL. . . . . . . . . . . . GIPVVFTSSV
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   145....150 .........160
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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